RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 RERGLQ9H628 205 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 SLC38A7Q9NVC3 462 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 ATXN10Q9UBB4 475 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 AK5Q9Y6K8 562 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 DYTNA2CJ06 578 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 PTGES3LE9PB15 166 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 HBP1O60381 514 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 CBFA2T3O75081 653 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 PKNOX1P55347 436 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 WASHC5Q12768 1159 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 TRAF3Q13114 568 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 NRF1Q16656 503 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 TMEM119Q4V9L6 283 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 DALRD3Q5D0E6 543 aaKnown RBP10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 EFCAB12Q6NXP0 572 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 BHLHE22Q8NFJ8 381 aaPredicted RBP10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 ZNF606Q8WXB4 792 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 RIOX1Q9H6W3 641 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 WDR41Q9HAD4 459 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 GGA3Q9NZ52 723 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 C15orf38-AP3S2A0A0A6YYH1 394 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 FAM237BA0A1B0GVD1 139 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 C2orf81A6NN90 581 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 TAF4O00268 1085 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 ATG7O95352 703 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 JCHAINP01591 159 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 MAPTP10636 758 aaKnown RBP10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 PIK3R1P27986 724 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 GCLCP48506 637 aaPredicted RBP10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 TAF6P49848 677 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 SLC25A3Q00325 362 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 ISLR2Q6UXK2 745 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 TMEM26Q6ZUK4 368 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 ARPINQ7Z6K5 226 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 KATNAL2Q8IYT4 538 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 LENG1Q96BZ8 264 aaPredicted RBP10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 NDNQ99608 321 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 SEMA6AQ9H2E6 1030 aa10.93□□□□□ -0.66
CLTCL1-209ENST00000617103 C2CD2LO14523 706 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 NCAM2O15394 837 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 NTSR2O95665 410 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 SERPIND1P05546 499 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 PGAM1P18669 254 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 CYP2F1P24903 491 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 PSMC6P62333 389 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 PTPN11Q06124 597 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 PDZK1Q5T2W1 519 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 TIGD7Q6NT04 549 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 ZDHHC13Q8IUH4 622 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 ELMOD1Q8N336 334 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 ST13P5Q8NFI4 369 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 INPP4AQ96PE3 977 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 CRAMP1Q96RY5 1269 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 CPNE1Q99829 537 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 UGT2B28Q9BY64 529 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 PIF1Q9H611 641 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 BLOC1S4Q9NUP1 217 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 DPP3Q9NY33 737 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 CCDC167Q9P0B6 97 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 H0YC42 278 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 CD151P48509 253 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 SFSWAPQ12872 951 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 ORC1Q13415 861 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 NAB1Q13506 487 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 TRIM71Q2Q1W2 868 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 PPP4R4Q6NUP7 873 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 AAGABQ6PD74 315 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 BRINP3Q76B58 766 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 CHSY1Q86X52 802 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 FAM131BQ86XD5 332 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 APOBEC3FQ8IUX4 373 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 FLCNQ8NFG4 579 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 MCRS1Q96EZ8 462 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 CRLS1Q9UJA2 301 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 PNMA8BQ9ULN7 279 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 MYO3AQ8NEV4 1616 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 NCF1BA6NI72 391 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 NCF1CA8MVU1 366 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 ADCY6O43306 1168 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 IFNA14P01570 189 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 ARP10275 920 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 NCF1P14598 390 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 ETS1P14921 441 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 HNRNPH3P31942 346 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 MAPK10P53779 464 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 FBXW4P57775 412 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 HPCAP84074 193 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 NR6A1Q15406 480 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 LACTB2Q53H82 288 aaPredicted RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 TRIQKQ629K1 86 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 RBM44Q6ZP01 1051 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 ADCK2Q7Z695 626 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 ACOT1Q86TX2 421 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 MIER2Q8N344 545 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 ART4Q93070 314 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 DGCR14Q96DF8 476 aaKnown RBP10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 DEPDC7Q96QD5 511 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 TAAR1Q96RJ0 339 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 NMRK1Q9NWW6 199 aa10.92□□□□□ -0.66
CLTCL1-209ENST00000617103 OVOS2A0A0J9YW53 1432 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms