RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CNGB3Q9NQW8 809 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 TUBGCP4Q9UGJ1 667 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 RRP15Q9Y3B9 282 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 NT5C1B-RDH14C9J2C7 533 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ARVCFO00192 962 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 TIMM44O43615 452 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 CAND2O75155 1236 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 APOA4P06727 396 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 POLR2EP19388 210 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 OR1D2P34982 312 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 JAG1P78504 1218 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ILF2Q12905 390 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 PTK2BQ14289 1009 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 LRRC14Q15048 493 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 OOSP2Q86WS3 158 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 LRRC6Q86X45 466 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 PHF13Q86YI8 300 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 HTR3CQ8WXA8 447 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 GBP5Q96PP8 586 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 WWP1Q9H0M0 922 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 PKD2L2Q9NZM6 624 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 SEPT3Q9UH03 358 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ZFP69BQ9UJL9 534 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 VANGL2Q9ULK5 521 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 PLCH1Q4KWH8 1693 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ARHGAP10A1A4S6 786 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 MAGEB16A2A368 324 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 CCDC22O60826 627 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 HAUS5O94927 633 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 KCNMA1Q12791 1236 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 EFTUD2Q15029 972 aaKnown RBP eCLIP9.72□□□□□ -0.853e-6■■■■■ 41.9
CLTCL1-208ENST00000615606 SNCBQ16143 134 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ANKRD20A4Q4UJ75 823 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ANKRD20A8PQ5CZ79 823 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ANKRD20A2Q5SQ80 823 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ANKRD20A1Q5TYW2 823 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 VSTM1Q6UX27 236 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ILDR2Q71H61 639 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 NLRP9Q7RTR0 991 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 KATNAL2Q8IYT4 538 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 FBXO22Q8NEZ5 403 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 C2orf49Q9BVC5 232 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 CLPBQ9H078 707 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ZNF536O15090 1300 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 FAM47DPA6NHR8 397 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 IGF2BP3O00425 579 aaKnown RBP eCLIP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 SOAT2O75908 522 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 STX3Q13277 289 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 MTM1Q13496 603 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 ZNF792Q3KQV3 632 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 NUP188Q5SRE5 1749 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 BEND6Q5SZJ8 279 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 LRRC38Q5VT99 294 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 OTOP2Q7RTS6 562 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 EFL1Q7Z2Z2 1120 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 DNAAF5Q86Y56 855 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 SNX31Q8N9S9 440 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 NPLOC4Q8TAT6 608 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 TRMT13Q9NUP7 481 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 DCTN4Q9UJW0 460 aa9.72□□□□□ -0.85
CLTCL1-208ENST00000615606 PKD1L3Q7Z443 1732 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 EIF3HO15372 352 aaKnown RBP eCLIP9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 CYP1A2P05177 515 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 NDUFV1P49821 464 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 NAA30Q147X3 362 aaPredicted RBP9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 MFSD7Q6UXD7 560 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 NCLNQ969V3 563 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 APOL5Q9BWW9 433 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 GTF2IRD1Q9UHL9 959 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 NUDT5Q9UKK9 219 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 SLC27A5Q9Y2P5 690 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 PLA2G4AP47712 749 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 ENPEPQ07075 957 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 CDH17Q12864 832 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 MAMLD1Q13495 774 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 FNDC3BQ53EP0 1204 aaKnown RBP9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 PLPP4Q5VZY2 271 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 FBXO36Q8NEA4 188 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 LPCAT1Q8NF37 534 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 NDE1Q9NXR1 346 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 OR12D3Q9UGF7 316 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 NCKAP1Q9Y2A7 1128 aa9.71□□□□□ -0.85
CLTCL1-208ENST00000615606 COL2A1P02458 1487 aaPredicted RBP9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 NWD2Q9ULI1 1742 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 APOC4-APOC2K7ER74 178 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 CAPN15O75808 1086 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 APOC2P02655 101 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 CCL5P13501 91 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 IL1RL1Q01638 556 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 NPY5RQ15761 445 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 ZC3H12AQ5D1E8 599 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 AGAP9Q5VTM2 703 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 NT5DC3Q86UY8 548 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 MON1AQ86VX9 555 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 C4orf33Q8N1A6 199 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 RNF217Q8TC41 542 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 RSPH1Q8WYR4 309 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 SUSD6Q92537 303 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 MRPL45Q9BRJ2 306 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 PRKD2Q9BZL6 878 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms