RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 NT5C1AQ9BXI3 368 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 PLEKHA5Q9HAU0 1116 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 NPHS2Q9NP85 383 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 DNAJB4Q9UDY4 337 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 RALGAPA2Q2PPJ7 1873 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 CLUHO75153 1309 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 ZSCAN9O15535 394 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 TREHO43280 583 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 RECQL4O94761 1208 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 TRUB2O95900 331 aaKnown RBP13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 PFKMP08237 780 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 MYL3P08590 195 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 CA4P22748 312 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 RPA3P35244 121 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 GPX6P59796 221 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 ADAM17P78536 824 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 MYBPC3Q14896 1274 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 KRT72Q14CN4 511 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 ZBTB6Q15916 424 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 TAZQ16635 292 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 CCDC142Q17RM4 750 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 OR6B2Q6IFH4 312 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 KBTBD2Q8IY47 623 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 USP6NLQ92738 828 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 DERAQ9Y315 318 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 SNX9Q9Y5X1 595 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 HAS3O00219 553 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 ALOX15BO15296 676 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 TYROBPO43914 113 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 KRT15P19012 456 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 AKAP5P24588 427 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 SSTR1P30872 391 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 ZNF157P51786 506 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 EIF3EP60228 445 aaKnown RBP13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 DSG1Q02413 1049 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 GOLGA7BQ2TAP0 167 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 LCLAT1Q6UWP7 414 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 CYP4V2Q6ZWL3 525 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 RXFP2Q8WXD0 754 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 FAM49BQ9NUQ9 324 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 ARL8BQ9NVJ2 186 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 GPATCH2LQ9NWQ4 482 aa13.08□□□□□ -0.31
PCDHGA4-202ENST00000612927 SCN1AP35498 2009 aa13.08□□□□□ -0.32
PCDHGA4-202ENST00000612927 UBTFL6P0CB48 400 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA4-202ENST00000612927 RAP1GDS1P52306 607 aa13.08□□□□□ -0.32
PCDHGA4-202ENST00000612927 CDH6P55285 790 aa13.08□□□□□ -0.32
PCDHGA4-202ENST00000612927 SLC1A5Q15758 541 aa13.08□□□□□ -0.32
PCDHGA4-202ENST00000612927 SH2D4BQ5SQS7 431 aa13.08□□□□□ -0.32
PCDHGA4-202ENST00000612927 ST13P4Q8IZP2 240 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA4-202ENST00000612927 CMASQ8NFW8 434 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA4-202ENST00000612927 SPATA18Q8TC71 538 aa13.08□□□□□ -0.32
PCDHGA4-202ENST00000612927 CCDC97Q96F63 343 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA4-202ENST00000612927 APOC4-APOC2K7ER74 178 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 HCRTO43612 131 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 MAP3K6O95382 1288 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 APOC2P02655 101 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 RBP3P10745 1247 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 PDGFRAP16234 1089 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 ZNF143P52747 638 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 BASP1P80723 227 aaKnown RBP13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 CDC42EP1Q00587 391 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 SNX17Q15036 470 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 PPP1R26Q5T8A7 1209 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 FAM91A1Q658Y4 838 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 ALKAL1Q6UXT8 129 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 MARK2Q7KZI7 788 aaKnown RBP13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 ACOT1Q86TX2 421 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 PPIL6Q8IXY8 311 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 NME8Q8N427 588 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 NAT8LQ8N9F0 302 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 LRRN4Q8WUT4 740 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 PLEKHG4BQ96PX9 1271 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 LPIN3Q9BQK8 851 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 KLK14Q9P0G3 267 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 CNTN3Q9P232 1028 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 CIDEBQ9UHD4 219 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 PIN4Q9Y237 131 aaKnown RBP13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 EFR3BQ9Y2G0 817 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 A0A1W2PPM1 405 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 C2CD4BA6NLJ0 364 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 MCF2LO15068 1137 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 MAGEC1O60732 1142 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 GPD1P21695 349 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 CRABP2P29373 138 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 IRF5Q13568 498 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 PLEKHG4Q58EX7 1191 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 C17orf99Q6UX52 265 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 PDCD7Q8N8D1 485 aaKnown RBP13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 TTC13Q8NBP0 860 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 BEST2Q8NFU1 509 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 DTX3LQ8TDB6 740 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 WDR60Q8WVS4 1066 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 TRIM55Q9BYV6 548 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 OCEL1Q9H607 264 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 NMRK2Q9NPI5 230 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 DNAAF2Q9NVR5 837 aaKnown RBP13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 ASNSD1Q9NWL6 643 aa13.07□□□□□ -0.32
PCDHGA4-202ENST00000612927 KANSL3Q9P2N6 904 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms