RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 DNAJC24Q6P3W2 148 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 RSRC2Q7L4I2 434 aaKnown RBP19.67■□□□□ 0.74
CCDC9-205ENST00000600117 LRRC8AQ8IWT6 810 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 SUMF1Q8NBK3 374 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 RIN3Q8TB24 985 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 DQX1Q8TE96 717 aaKnown RBP19.67■□□□□ 0.74
CCDC9-205ENST00000600117 RNF139Q8WU17 664 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 EIF3CQ99613 913 aaKnown RBP19.67■□□□□ 0.74
CCDC9-205ENST00000600117 KLF16Q9BXK1 252 aaPredicted RBP19.67■□□□□ 0.74
CCDC9-205ENST00000600117 THAP2Q9H0W7 228 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 CNOT8Q9UFF9 292 aaKnown RBP19.67■□□□□ 0.74
CCDC9-205ENST00000600117 DNMT3LQ9UJW3 386 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 CCL26Q9Y258 94 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 EPN1Q9Y6I3 576 aaPredicted RBP19.67■□□□□ 0.74
CCDC9-205ENST00000600117 MIA3Q5JRA6 1907 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 ANKRD62A6NC57 917 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 NDUFA10O95299 355 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 VIPR2P41587 438 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 MATKP42679 507 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 RNASE9P60153 205 aaKnown RBP19.66■□□□□ 0.74
CCDC9-205ENST00000600117 PITX1P78337 314 aaPredicted RBP19.66■□□□□ 0.74
CCDC9-205ENST00000600117 EFEMP1Q12805 493 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 MAMLD1Q13495 774 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 HTR4Q13639 388 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 TANGO2Q6ICL3 276 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 PARM1Q6UWI2 310 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 TADA2BQ86TJ2 420 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 EMC1Q8N766 993 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 ST13P5Q8NFI4 369 aaPredicted RBP19.66■□□□□ 0.74
CCDC9-205ENST00000600117 ARHGEF26Q96DR7 871 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 DDX23Q9BUQ8 820 aaKnown RBP19.66■□□□□ 0.74
CCDC9-205ENST00000600117 SELENOOQ9BVL4 669 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 ARHGEF3Q9NR81 526 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 TDP1Q9NUW8 608 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 MARCH2Q9P0N8 246 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 RASAL2Q9UJF2 1139 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 CPQQ9Y646 472 aa19.66■□□□□ 0.74
CCDC9-205ENST00000600117 CAPN9O14815 690 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 IGLV3-25P01717 112 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 CYP1A2P05177 515 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 H2AFZP0C0S5 128 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 KRT3P12035 628 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 TCF3P15923 654 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 SDHBP21912 280 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 NOS2P35228 1153 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 RFC1P35251 1148 aaPredicted RBP19.65■□□□□ 0.74
CCDC9-205ENST00000600117 USP4Q13107 963 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 DCAF6Q58WW2 860 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 OTUD1Q5VV17 481 aaPredicted RBP19.65■□□□□ 0.74
CCDC9-205ENST00000600117 H2AFVQ71UI9 128 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 CELF5Q8N6W0 485 aaKnown RBP19.65■□□□□ 0.74
CCDC9-205ENST00000600117 FGF14Q92915 247 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 WBP2Q969T9 261 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 LRRC3BQ96PB8 259 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 NPY6RQ99463 290 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 ADAM33Q9BZ11 813 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 NACA2Q9H009 215 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 KIF9Q9HAQ2 790 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 GKN1Q9NS71 199 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 SMPD4Q9NXE4 827 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.65■□□□□ 0.74
CCDC9-205ENST00000600117 MYO1AQ9UBC5 1043 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 SFMBT1Q9UHJ3 866 aa19.65■□□□□ 0.74
CCDC9-205ENST00000600117 REXO2Q9Y3B8 237 aaKnown RBP19.65■□□□□ 0.74
CCDC9-205ENST00000600117 C2CD4BA6NLJ0 364 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 RPL7AP62424 266 aaKnown RBP19.64■□□□□ 0.73
CCDC9-205ENST00000600117 GPC5P78333 572 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 CCZ1BP86790 482 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 CCZ1P86791 482 aaPredicted RBP19.64■□□□□ 0.73
CCDC9-205ENST00000600117 EIF4EBP2Q13542 120 aaPredicted RBP19.64■□□□□ 0.73
CCDC9-205ENST00000600117 ZNF77Q15935 545 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 C10orf76Q5T2E6 689 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 MTSS1LQ765P7 747 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 TAC4Q86UU9 113 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 MIB1Q86YT6 1006 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 CCDC112Q8NEF3 446 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 SH3RF2Q8TEC5 729 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 RXFP2Q8WXD0 754 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 NT5C3BQ969T7 300 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 MCEEQ96PE7 176 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 PPP1R9BQ96SB3 815 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 RPP25Q9BUL9 199 aaKnown RBP19.64■□□□□ 0.73
CCDC9-205ENST00000600117 PLA2G2FQ9BZM2 168 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 ZFP14Q9HCL3 533 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 PARVAQ9NVD7 372 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 OBP2AQ9NY56 170 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 NUMBLQ9Y6R0 609 aa19.64■□□□□ 0.73
CCDC9-205ENST00000600117 KIF26AQ9ULI4 1882 aaPredicted RBP19.64■□□□□ 0.73
CCDC9-205ENST00000600117 SLC12A8A0AV02 714 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 HEPACAM2A8MVW5 462 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 LEFTY2O00292 366 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 IRAK2O43187 625 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 MSI1O43347 362 aaKnown RBP19.63■□□□□ 0.73
CCDC9-205ENST00000600117 GREM1O60565 184 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 ECI2O75521 394 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 TRUB2O95900 331 aaKnown RBP19.63■□□□□ 0.73
CCDC9-205ENST00000600117 TMEM253P0C7T8 217 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 TFE3P19532 575 aaPredicted RBP19.63■□□□□ 0.73
CCDC9-205ENST00000600117 MAGEA1P43355 309 aa19.63■□□□□ 0.73
CCDC9-205ENST00000600117 BNIPLQ7Z465 357 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms