RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 PENKP01210 267 aaPredicted RBP19.61■□□□□ 0.73
PNKP-213ENST00000599543 CYBBP04839 570 aa19.61■□□□□ 0.73
PNKP-213ENST00000599543 NOVA1P51513 510 aaKnown RBP19.61■□□□□ 0.73
PNKP-213ENST00000599543 PDE4CQ08493 712 aa19.61■□□□□ 0.73
PNKP-213ENST00000599543 LRMPQ12912 555 aa19.61■□□□□ 0.73
PNKP-213ENST00000599543 FYB2Q5VWT5 728 aa19.61■□□□□ 0.73
PNKP-213ENST00000599543 KIAA1211LQ6NV74 962 aa19.61■□□□□ 0.73
PNKP-213ENST00000599543 DENND1CQ8IV53 801 aa19.61■□□□□ 0.73
PNKP-213ENST00000599543 ULBP1Q9BZM6 244 aa19.61■□□□□ 0.73
PNKP-213ENST00000599543 METTL14Q9HCE5 456 aaKnown RBP19.61■□□□□ 0.73
PNKP-213ENST00000599543 AGO1Q9UL18 857 aaKnown RBP19.61■□□□□ 0.73
PNKP-213ENST00000599543 TULP2O00295 520 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 GFRA2O00451 464 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 NDUFV2P19404 249 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 ITPKAP23677 461 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 HOXD12P35452 270 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 PPP1R2P41236 205 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 ADIGQ0VDE8 80 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 CCDC40Q4G0X9 1142 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 PM20D1Q6GTS8 502 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 CAVIN1Q6NZI2 390 aaKnown RBP19.6■□□□□ 0.73
PNKP-213ENST00000599543 SIX6OS1Q8N1H7 587 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 PLD4Q96BZ4 506 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 SRRTQ9BXP5 876 aaKnown RBP19.6■□□□□ 0.73
PNKP-213ENST00000599543 CD248Q9HCU0 757 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 OLA1Q9NTK5 396 aaKnown RBP19.6■□□□□ 0.73
PNKP-213ENST00000599543 TMEM74BQ9NUR3 256 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 FBXO10Q9UK96 956 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 CYP8B1Q9UNU6 501 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 SLC27A6Q9Y2P4 619 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 RAD54BQ9Y620 910 aa19.6■□□□□ 0.73
PNKP-213ENST00000599543 IGHV1OR15-9A0A0B4J2B8 117 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 BICDL2A1A5D9 508 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 CDX4O14627 284 aaPredicted RBP19.59■□□□□ 0.73
PNKP-213ENST00000599543 VDRP11473 427 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 PMLP29590 882 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 FMO5P49326 533 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 MFAP3P55082 362 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 STARD3Q14849 445 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 CCDC183Q5T5S1 534 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 CPXM2Q8N436 756 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 DEFB119Q8N690 84 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 MLKLQ8NB16 471 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 RNF139Q8WU17 664 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 UCMAQ8WVF2 138 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 P2RY11Q96G91 374 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 PILRBQ9UKJ0 227 aa19.59■□□□□ 0.73
PNKP-213ENST00000599543 USP24Q9UPU5 2620 aa19.58■□□□□ 0.73
PNKP-213ENST00000599543 CKAP5Q14008 2032 aa19.58■□□□□ 0.73
PNKP-213ENST00000599543 NPC1O15118 1278 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 CFIP05156 583 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 SETSIPP0DME0 302 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 MAPK8P45983 427 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 HARS2P49590 506 aaKnown RBP19.58■□□□□ 0.72
PNKP-213ENST00000599543 CETN1Q12798 172 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 GEN1Q17RS7 908 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 UAP1L1Q3KQV9 507 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 SH3PXD2AQ5TCZ1 1133 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 SLC23A3Q6PIS1 610 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 TMEM270Q6UE05 265 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 KIAA1324Q6UXG2 1013 aaKnown RBP19.58■□□□□ 0.72
PNKP-213ENST00000599543 ANKS1BQ7Z6G8 1248 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 CREBRFQ8IUR6 639 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 FMNL3Q8IVF7 1028 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 UBA3Q8TBC4 463 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 DDI1Q8WTU0 396 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 NDRG1Q92597 394 aaKnown RBP19.58■□□□□ 0.72
PNKP-213ENST00000599543 MRGPRX1Q96LB2 322 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 CEP63Q96MT8 703 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 NT5C1BQ96P26 610 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 RWDD2AQ9UIY3 292 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 KIAA1257Q9ULG3 409 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 STON1Q9Y6Q2 735 aa19.58■□□□□ 0.72
PNKP-213ENST00000599543 CACNA1EQ15878 2313 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 ASPMQ8IZT6 3477 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 WASH3PC4AMC7 463 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 O00370 1275 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 ENGP17813 658 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 ZNF33AQ06730 810 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 E2F5Q15329 346 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 HSP90AA4PQ58FG1 418 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 PEAR1Q5VY43 1037 aaPredicted RBP19.57■□□□□ 0.72
PNKP-213ENST00000599543 RBM43Q6ZSC3 357 aaKnown RBP19.57■□□□□ 0.72
PNKP-213ENST00000599543 BHLHA9Q7RTU4 235 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 RABEPKQ7Z6M1 372 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 PPM1KQ8N3J5 372 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 UBR7Q8N806 425 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 CEP76Q8TAP6 659 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 EDEM1Q92611 657 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 SLC6A17Q9H1V8 727 aa19.57■□□□□ 0.72
PNKP-213ENST00000599543 HBS1LQ9Y450 684 aaKnown RBP19.57■□□□□ 0.72
PNKP-213ENST00000599543 YJEFN3A6XGL0 299 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 E7ENQ6 273 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 NDUFS2O75306 463 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 PAEPP09466 180 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 LCP1P13796 627 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 ATXN3P54252 364 aaPredicted RBP19.56■□□□□ 0.72
PNKP-213ENST00000599543 SHC2P98077 582 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 ZNF252P-AS1Q0IIN9 211 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 EIF4HQ15056 248 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms