RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 DNAJC28Q9NX36 388 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 ZNF70Q9UC06 446 aaPredicted RBP16.03■□□□□ 0.16
IRF3-219ENST00000597636 PCDHGB4Q9UN71 923 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 PCDHGB5Q9Y5G0 923 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 WNT10BO00744 389 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 CNGA3Q16281 694 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 FAXCQ5TGI0 409 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 C16orf46Q6P387 395 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 AHI1Q8N157 1196 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 LRRC39Q96DD0 335 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 KCNK16Q96T55 309 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 GMLQ99445 158 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 FAM96AQ9H5X1 160 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 ZNF696Q9H7X3 374 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 RAB26Q9ULW5 256 aa16.03■□□□□ 0.16
IRF3-219ENST00000597636 TESPA1A2RU30 521 aaPredicted RBP16.02■□□□□ 0.16
IRF3-219ENST00000597636 ADCY3O60266 1144 aa16.02■□□□□ 0.16
IRF3-219ENST00000597636 TNFAIP8O95379 198 aa16.02■□□□□ 0.16
IRF3-219ENST00000597636 TRUB2O95900 331 aaKnown RBP16.02■□□□□ 0.16
IRF3-219ENST00000597636 ACAT1P24752 427 aaKnown RBP16.02■□□□□ 0.16
IRF3-219ENST00000597636 CAP2P40123 477 aa16.02■□□□□ 0.16
IRF3-219ENST00000597636 PSMC1P62191 440 aaKnown RBP16.02■□□□□ 0.16
IRF3-219ENST00000597636 PEX6Q13608 980 aa16.02■□□□□ 0.16
IRF3-219ENST00000597636 ISLR2Q6UXK2 745 aa16.02■□□□□ 0.16
IRF3-219ENST00000597636 ATP6V0A1Q93050 837 aa16.02■□□□□ 0.16
IRF3-219ENST00000597636 SENP6Q9GZR1 1112 aaPredicted RBP16.02■□□□□ 0.16
IRF3-219ENST00000597636 SUDS3Q9H7L9 328 aaPredicted RBP16.02■□□□□ 0.16
IRF3-219ENST00000597636 CYP26B1Q9NR63 512 aa16.02■□□□□ 0.16
IRF3-219ENST00000597636 PNPOQ9NVS9 261 aa16.02■□□□□ 0.16
IRF3-219ENST00000597636 TMOD2Q9NZR1 351 aa16.02■□□□□ 0.16
IRF3-219ENST00000597636 EMCNQ9ULC0 261 aa16.02■□□□□ 0.16
IRF3-219ENST00000597636 ARHGAP26Q9UNA1 814 aa16.02■□□□□ 0.16
IRF3-219ENST00000597636 TELO2Q9Y4R8 837 aa16.02■□□□□ 0.16
IRF3-219ENST00000597636 ARHGAP10A1A4S6 786 aa16.02■□□□□ 0.15
IRF3-219ENST00000597636 ATG7O95352 703 aa16.02■□□□□ 0.15
IRF3-219ENST00000597636 CRTAMO95727 393 aa16.02■□□□□ 0.15
IRF3-219ENST00000597636 APRTP07741 180 aa16.02■□□□□ 0.15
IRF3-219ENST00000597636 SETSIPP0DME0 302 aa16.02■□□□□ 0.15
IRF3-219ENST00000597636 ATP6V1B1P15313 513 aa16.02■□□□□ 0.15
IRF3-219ENST00000597636 CNTN2Q02246 1040 aa16.02■□□□□ 0.15
IRF3-219ENST00000597636 GSDMBQ8TAX9 411 aa16.02■□□□□ 0.15
IRF3-219ENST00000597636 GAB3Q8WWW8 586 aa16.02■□□□□ 0.15
IRF3-219ENST00000597636 TRIM56Q9BRZ2 755 aaKnown RBP16.02■□□□□ 0.15
IRF3-219ENST00000597636 USP18Q9UMW8 372 aa16.02■□□□□ 0.15
IRF3-219ENST00000597636 KCNN4O15554 427 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 NCF2P19878 526 aaPredicted RBP16.01■□□□□ 0.15
IRF3-219ENST00000597636 KCNA4P22459 653 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 ADARP55265 1226 aaKnown RBP16.01■□□□□ 0.15
IRF3-219ENST00000597636 YWHAEP62258 255 aaKnown RBP16.01■□□□□ 0.15
IRF3-219ENST00000597636 CPXCR1Q8N123 301 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 PHTF2Q8N3S3 785 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 TARS2Q9BW92 718 aaKnown RBP16.01■□□□□ 0.15
IRF3-219ENST00000597636 SDCBP2Q9H190 292 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 IFT122Q9HBG6 1241 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 SEPT9Q9UHD8 586 aaPredicted RBP16.01■□□□□ 0.15
IRF3-219ENST00000597636 CYTH4Q9UIA0 394 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 ZNF195O14628 629 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 ZMPSTE24O75844 475 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 FBXO21O94952 628 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 PIGRP01833 764 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 SERPINE1P05121 402 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 SRGAP2CP0DJJ0 459 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 SRGAP2BP0DMP2 458 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 ALOX15P16050 662 aaPredicted RBP16.01■□□□□ 0.15
IRF3-219ENST00000597636 GMPSP49915 693 aaPredicted RBP16.01■□□□□ 0.15
IRF3-219ENST00000597636 MYL6P60660 151 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 RPS6P62753 249 aaKnown RBP16.01■□□□□ 0.15
IRF3-219ENST00000597636 MYBPC1Q00872 1141 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 SULT2A1Q06520 285 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 SEZ6Q53EL9 994 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 N4BP2L1Q5TBK1 243 aaPredicted RBP16.01■□□□□ 0.15
IRF3-219ENST00000597636 ATG14Q6ZNE5 492 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 ILDR2Q71H61 639 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 PPP4R1Q8TF05 950 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 SORT1Q99523 831 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 PDCD2LQ9BRP1 358 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 GLIS2Q9BZE0 524 aaPredicted RBP16.01■□□□□ 0.15
IRF3-219ENST00000597636 NIF3L1Q9GZT8 377 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 KLC2Q9H0B6 622 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 SPON1Q9HCB6 807 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 AP4B1Q9Y6B7 739 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 COQ9O75208 318 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 ENDOD1O94919 500 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 COX4I1P13073 169 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 TPP2P29144 1249 aaPredicted RBP16.01■□□□□ 0.15
IRF3-219ENST00000597636 MAGEA6P43360 314 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 EMP3P54852 163 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 HDAC4P56524 1084 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 DCTN2Q13561 401 aaKnown RBP16.01■□□□□ 0.15
IRF3-219ENST00000597636 TFDP2Q14188 446 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 VWA5B1Q5TIE3 1220 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 SWSAP1Q6NVH7 229 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 RTP4Q96DX8 246 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 MAML3Q96JK9 1138 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 APPL1Q9UKG1 709 aa16.01■□□□□ 0.15
IRF3-219ENST00000597636 COL2A1P02458 1487 aaPredicted RBP16■□□□□ 0.15
IRF3-219ENST00000597636 K7ERI5 159 aa16■□□□□ 0.15
IRF3-219ENST00000597636 PLIN3O60664 434 aa16■□□□□ 0.15
IRF3-219ENST00000597636 DKC1O60832 514 aaKnown RBP eCLIP16■□□□□ 0.159e-9■■■□□ 15.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms