RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.37□□□□□ -0.43
NPC1-214ENST00000593280 PLXNA3P51805 1871 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 MICAL3Q7RTP6 2002 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 SF3B1O75533 1304 aaKnown RBP eCLIP12.37□□□□□ -0.43
NPC1-214ENST00000593280 GOLGA8MH3BSY2 632 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 EEF2KO00418 725 aaKnown RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 CREB3O43889 395 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 SHOX2O60902 331 aaPredicted RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 MAP3K6O95382 1288 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 CXCL10P02778 98 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 IVLP07476 585 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 ABHD2P08910 425 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 ADRA1BP35368 520 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 SLC5A3P53794 718 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 CCL23P55773 120 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 MAGOHP61326 146 aaKnown RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 IFRD2Q12894 506 aaPredicted RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 CTXN3Q4LDR2 81 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 EMC10Q5UCC4 262 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 FAM171A1Q5VUB5 890 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 ANKRD22Q5VYY1 191 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 ZNF280DQ6N043 979 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 SLC39A5Q6ZMH5 540 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 BZW1Q7L1Q6 419 aaKnown RBP12.37□□□□□ -0.43
NPC1-214ENST00000593280 BEND5Q7L4P6 421 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 CEP57Q86XR8 500 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 SCN4BQ8IWT1 228 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 SCAMP5Q8TAC9 235 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 TLCD1Q96CP7 247 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 FUBP3Q96I24 572 aaKnown RBP eCLIP12.37□□□□□ -0.43
NPC1-214ENST00000593280 PPP1R12CQ9BZL4 782 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 FBXW11Q9UKB1 542 aa12.37□□□□□ -0.43
NPC1-214ENST00000593280 TTC3P53804 2025 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.36□□□□□ -0.43
NPC1-214ENST00000593280 OR6C75A6NL08 312 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 A6NNZ2 444 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 TBKBP1A7MCY6 615 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 HACD1B0YJ81 288 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 TNFRSF10BO14763 440 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 MFSD11O43934 449 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 AGTP01019 485 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 ALDH2P05091 517 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 SLCO1A2P46721 670 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 SLC11A1P49279 550 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 NRLP54845 237 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 YWHAGP61981 247 aaKnown RBP eCLIP12.36□□□□□ -0.43
NPC1-214ENST00000593280 PPP2R2AP63151 447 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 FAAP100Q0VG06 881 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 SLC10A2Q12908 348 aaPredicted RBP12.36□□□□□ -0.43
NPC1-214ENST00000593280 PDIA2Q13087 525 aaKnown RBP12.36□□□□□ -0.43
NPC1-214ENST00000593280 DPYSQ14117 519 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 LONRF1Q17RB8 773 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 TUBB8Q3ZCM7 444 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 TRIM60Q495X7 471 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 MFSD5Q6N075 450 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 C4orf22Q6V702 233 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 RFX8Q6ZV50 586 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 TAC4Q86UU9 113 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 ZBED8Q8IZ13 594 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 DQX1Q8TE96 717 aaKnown RBP12.36□□□□□ -0.43
NPC1-214ENST00000593280 SERPINB12Q96P63 405 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 TMEM175Q9BSA9 504 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 ETNK2Q9NVF9 386 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 MARCH5Q9NX47 278 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 DTLQ9NZJ0 730 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 XPO7Q9UIA9 1087 aaKnown RBP12.36□□□□□ -0.43
NPC1-214ENST00000593280 PCDHB5Q9Y5E4 795 aa12.36□□□□□ -0.43
NPC1-214ENST00000593280 TET1Q8NFU7 2136 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 A0A087WUV0 522 aaPredicted RBP12.35□□□□□ -0.43
NPC1-214ENST00000593280 TRIM66O15016 1216 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 CHADO15335 359 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 EIF3HO15372 352 aaKnown RBP eCLIP12.35□□□□□ -0.43
NPC1-214ENST00000593280 TMEM63AO94886 807 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 FGFR3P22607 806 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 CYP2C18P33260 490 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 CXCR3P49682 368 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 TPI1P60174 286 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 GNGT1P63211 74 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 ELAVL2Q12926 359 aaKnown RBP12.35□□□□□ -0.43
NPC1-214ENST00000593280 KCNJ11Q14654 390 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 STAT4Q14765 748 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 FASTKD3Q14CZ7 662 aaKnown RBP12.35□□□□□ -0.43
NPC1-214ENST00000593280 BTBD8Q5XKL5 378 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 HEATR6Q6AI08 1181 aaKnown RBP12.35□□□□□ -0.43
NPC1-214ENST00000593280 FUT10Q6P4F1 479 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 KCNT2Q6UVM3 1135 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 VSTM1Q6UX27 236 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 PPP1R21Q6ZMI0 780 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 LEKR1Q6ZMV7 388 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 DEFB128Q7Z7B8 93 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 CRIPAKQ8N1N5 446 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 LRRC43Q8N309 656 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 TFB1MQ8WVM0 346 aaKnown RBP12.35□□□□□ -0.43
NPC1-214ENST00000593280 TOX2Q96NM4 488 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 OLFM3Q96PB7 478 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 CCDC77Q9BR77 488 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 KLC2Q9H0B6 622 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 WDCPQ9H6R7 721 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 ABCC13Q9NSE7 274 aa12.35□□□□□ -0.43
NPC1-214ENST00000593280 HCSTQ9UBK5 93 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms