RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 NPC1O15118 1278 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 SYNCRIPO60506 623 aaKnown RBP11.3□□□□□ -0.6
RANBP3-230ENST00000593025 STC2O76061 302 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 FSBPO95073 299 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 LDHAP00338 332 aaKnown RBP11.3□□□□□ -0.6
RANBP3-230ENST00000593025 EPHX1P07099 455 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 CDK4P11802 303 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 CDH8P55286 799 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 INSM1Q01101 510 aaPredicted RBP11.3□□□□□ -0.6
RANBP3-230ENST00000593025 INAVAQ3KP66 663 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 SFMBT2Q5VUG0 894 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 TRAPPC11Q7Z392 1133 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 FUKQ8N0W3 1084 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 CACTIN-AS1Q8N1I8 211 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 EID2Q8N6I1 236 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 ZNF366Q8N895 744 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 OR2T3Q8NH03 318 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 NAF1Q96HR8 494 aaKnown RBP11.3□□□□□ -0.6
RANBP3-230ENST00000593025 ANKRD36BP1Q96IX9 119 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 AK8Q96MA6 479 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 ACCSQ96QU6 501 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 LGMNQ99538 433 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 NACA2Q9H009 215 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 XYLT2Q9H1B5 865 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 LHX5Q9H2C1 402 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 TMEM245Q9H330 911 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 DMAP1Q9NPF5 467 aaPredicted RBP11.3□□□□□ -0.6
RANBP3-230ENST00000593025 ELOVL2Q9NXB9 296 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 NUDT5Q9UKK9 219 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 LIMCH1Q9UPQ0 1083 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 PCDHB1Q9Y5F3 818 aa11.3□□□□□ -0.6
RANBP3-230ENST00000593025 A0A1W2PR77 199 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 A8MXQ7 604 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 CYP26A1O43174 497 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 TNNC2P02585 160 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 FAM163BP0C2L3 166 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 ACADMP11310 421 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 GLDCP23378 1020 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 EPHA8P29322 1005 aaPredicted RBP11.29□□□□□ -0.6
RANBP3-230ENST00000593025 UBA7P41226 1012 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 CSRP3P50461 194 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 TMPRSS3P57727 454 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 RPS14P62263 151 aaKnown RBP11.29□□□□□ -0.6
RANBP3-230ENST00000593025 HMGN5P82970 282 aaKnown RBP11.29□□□□□ -0.6
RANBP3-230ENST00000593025 DUOXA2Q1HG44 320 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 RILPL1Q5EBL4 403 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 COLEC12Q5KU26 742 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 ZC3H3Q8IXZ2 948 aaKnown RBP11.29□□□□□ -0.6
RANBP3-230ENST00000593025 GPD1LQ8N335 351 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 NOC3LQ8WTT2 800 aaKnown RBP11.29□□□□□ -0.6
RANBP3-230ENST00000593025 MED8Q96G25 268 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 CALML4Q96GE6 196 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 SDCBP2Q9H190 292 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 SMYD3Q9H7B4 428 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 MRPL44Q9H9J2 332 aaKnown RBP11.29□□□□□ -0.6
RANBP3-230ENST00000593025 CSNK1G1Q9HCP0 422 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.29□□□□□ -0.6
RANBP3-230ENST00000593025 COMMD8Q9NX08 183 aa11.29□□□□□ -0.6
RANBP3-230ENST00000593025 TEP1Q99973 2627 aaKnown RBP11.29□□□□□ -0.6
RANBP3-230ENST00000593025 USP9YO00507 2555 aaPredicted RBP11.28□□□□□ -0.6
RANBP3-230ENST00000593025 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.28□□□□□ -0.6
RANBP3-230ENST00000593025 HHLA1C9JL84 531 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 DFNA5O60443 496 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 HOXD13P35453 343 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 ATP5C1P36542 298 aaKnown RBP11.28□□□□□ -0.6
RANBP3-230ENST00000593025 RACK1P63244 317 aaKnown RBP11.28□□□□□ -0.6
RANBP3-230ENST00000593025 KCNJ12Q14500 433 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 EIF4HQ15056 248 aaKnown RBP11.28□□□□□ -0.6
RANBP3-230ENST00000593025 WDR72Q3MJ13 1102 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 KLHDC10Q6PID8 442 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 ANKS1BQ7Z6G8 1248 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 WDR49Q8IV35 697 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 FAM184AQ8NB25 1140 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 ZNF248Q8NDW4 579 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 ELMO3Q96BJ8 720 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 SMARCD1Q96GM5 515 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 TRIM4Q9C037 500 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 OLFML3Q9NRN5 406 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 KRT82Q9NSB4 513 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.28□□□□□ -0.6
RANBP3-230ENST00000593025 SERGEFQ9UGK8 458 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 LSM7Q9UK45 103 aaKnown RBP11.28□□□□□ -0.6
RANBP3-230ENST00000593025 EXOC7Q9UPT5 735 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 CLCA2Q9UQC9 943 aa11.28□□□□□ -0.6
RANBP3-230ENST00000593025 NYNRINQ9P2P1 1898 aaKnown RBP11.27□□□□□ -0.6
RANBP3-230ENST00000593025 A0A1W2PPC4 97 aa11.27□□□□□ -0.61
RANBP3-230ENST00000593025 A0A1W2PQH9 124 aa11.27□□□□□ -0.61
RANBP3-230ENST00000593025 FRMD3A2A2Y4 597 aa11.27□□□□□ -0.61
RANBP3-230ENST00000593025 AP1G2O75843 785 aa11.27□□□□□ -0.61
RANBP3-230ENST00000593025 PRPF6O94906 941 aaKnown RBP11.27□□□□□ -0.61
RANBP3-230ENST00000593025 GCNT3O95395 438 aa11.27□□□□□ -0.61
RANBP3-230ENST00000593025 STAU1O95793 577 aaKnown RBP11.27□□□□□ -0.61
RANBP3-230ENST00000593025 ITGAVP06756 1048 aa11.27□□□□□ -0.61
RANBP3-230ENST00000593025 CCDC130P13994 396 aa11.27□□□□□ -0.61
RANBP3-230ENST00000593025 BCAT1P54687 386 aa11.27□□□□□ -0.61
RANBP3-230ENST00000593025 PCBP4P57723 403 aaKnown RBP11.27□□□□□ -0.61
RANBP3-230ENST00000593025 MYL6P60660 151 aa11.27□□□□□ -0.61
RANBP3-230ENST00000593025 BNIP3Q12983 259 aa11.27□□□□□ -0.61
RANBP3-230ENST00000593025 ILKQ13418 452 aa11.27□□□□□ -0.61
RANBP3-230ENST00000593025 PROX2Q3B8N5 592 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms