RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TULP3O75386 442 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 KIF20AO95235 890 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 HOXB2P14652 356 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 GNSP15586 552 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 ENGP17813 658 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 HOXD13P35453 343 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 ATP5C1P36542 298 aaKnown RBP9.95□□□□□ -0.82
BRCA1-226ENST00000591534 MAPK8P45983 427 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 PSMA6P60900 246 aaKnown RBP9.95□□□□□ -0.82
BRCA1-226ENST00000591534 BMT2Q1RMZ1 405 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 RESP18Q5W5W9 173 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 ARMCX6Q7L4S7 300 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 FAM35AQ86V20 835 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 UNC93AQ86WB7 457 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 CEP57L1Q8IYX8 460 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 CHPFQ8IZ52 775 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 MEIOBQ8N635 442 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 NAT16Q8N8M0 369 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 TERB1Q8NA31 727 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 DEFB124Q8NES8 71 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 CCDC47Q96A33 483 aaKnown RBP9.95□□□□□ -0.82
BRCA1-226ENST00000591534 CDK5RAP1Q96SZ6 601 aaKnown RBP9.95□□□□□ -0.82
BRCA1-226ENST00000591534 KCNK16Q96T55 309 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 INSM2Q96T92 566 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-226ENST00000591534 IMPG2Q9BZV3 1241 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 XYLT2Q9H1B5 865 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 SUSD2Q9UGT4 822 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 EGFL7Q9UHF1 273 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 PILRBQ9UKJ0 227 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 STARD13Q9Y3M8 1113 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 NEUROG3Q9Y4Z2 214 aa9.95□□□□□ -0.82
BRCA1-226ENST00000591534 FAM92AA1XBS5 289 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 SCAMP3O14828 347 aaKnown RBP9.94□□□□□ -0.82
BRCA1-226ENST00000591534 CAPN5O15484 640 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-226ENST00000591534 TLR5O60602 858 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 ADAM23O75077 832 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 SERPINF2P08697 491 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 ZDHHC11BP0C7U3 371 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 FAM200BP0CF97 657 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 NOS2P35228 1153 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 PTGER3P43115 390 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 ZNF132P52740 706 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 CACNA2D1P54289 1103 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 ZNF33AQ06730 810 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 SLC14A1Q13336 389 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 CUL4BQ13620 913 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 COX20Q5RI15 118 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 EMC10Q5UCC4 262 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 PEAR1Q5VY43 1037 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-226ENST00000591534 HTR3DQ70Z44 454 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 C12orf40Q86WS4 652 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 TMEM25Q86YD3 366 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 BBS7Q8IWZ6 715 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 ETFBKMTQ8IXQ9 262 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 CCDC150Q8NCX0 1101 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 SCAMP5Q8TAC9 235 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 ANP32BQ92688 251 aaKnown RBP9.94□□□□□ -0.82
BRCA1-226ENST00000591534 COL26A1Q96A83 441 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 SCNM1Q9BWG6 230 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 GTPBP2Q9BX10 602 aaKnown RBP9.94□□□□□ -0.82
BRCA1-226ENST00000591534 BBS2Q9BXC9 721 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 SMYD3Q9H7B4 428 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 CCSER2Q9H7U1 834 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 SLC39A2Q9NP94 309 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 KRT82Q9NSB4 513 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 DNAJC17Q9NVM6 304 aaKnown RBP9.94□□□□□ -0.82
BRCA1-226ENST00000591534 IL37Q9NZH6 218 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 GMIPQ9P107 970 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 ZNF232Q9UNY5 417 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 ZNF510Q9Y2H8 683 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 FRMD4BQ9Y2L6 1034 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 CNOT1A5YKK6 2376 aaKnown RBP9.94□□□□□ -0.82
BRCA1-226ENST00000591534 SDK1Q7Z5N4 2213 aa9.94□□□□□ -0.82
BRCA1-226ENST00000591534 A0A1B0GVL5 298 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 C1QTNF9BB2RNN3 333 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 NEDD8-MDP1E9PL57 170 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 GFRA2O00451 464 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 IKBKBO14920 756 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 NPC1O15118 1278 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 SMC2O95347 1197 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 C1QTNF9P0C862 333 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 IRF1P10914 325 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 ITPKAP23677 461 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 SYKP43405 635 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 AFMP43652 599 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 PLA2G4AP47712 749 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 CDH8P55286 799 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 MARSP56192 900 aaKnown RBP9.93□□□□□ -0.82
BRCA1-226ENST00000591534 SIM1P81133 766 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-226ENST00000591534 EHHADHQ08426 723 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 STARD3Q14849 445 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 ZNF423Q2M1K9 1284 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 WDR45BQ5MNZ6 344 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 TMEM214Q6NUQ4 689 aaKnown RBP9.93□□□□□ -0.82
BRCA1-226ENST00000591534 KLHDC10Q6PID8 442 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 SCARA5Q6ZMJ2 495 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 ACOT1Q86TX2 421 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 RGL4Q8IZJ4 473 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 ZNF295-AS1Q8N0V1 137 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 CRYBG2Q8N1P7 616 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms