RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ANGPTL3Q9Y5C1 460 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 F7P08709 466 aaPredicted RBP15.03■□□□□ -0
RETREG3-208ENST00000589797 GRM5P41594 1212 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 LHX1P48742 406 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 KIF19Q2TAC6 998 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 SH3D19Q5HYK7 790 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 ICE2Q659A1 982 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 CYP4X1Q8N118 509 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 TRIM33Q9UPN9 1127 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 KCNH4Q9UQ05 1017 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.03■□□□□ -0
RETREG3-208ENST00000589797 URB1O60287 2271 aaKnown RBP15.03■□□□□ -0
RETREG3-208ENST00000589797 ADAMTS7Q9UKP4 1686 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 SLC15A5A6NIM6 579 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 PRKAR2AP13861 404 aaKnown RBP15.02■□□□□ -0
RETREG3-208ENST00000589797 KLC3Q6P597 504 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 CYB5D1Q6P9G0 228 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 ZC3H3Q8IXZ2 948 aaKnown RBP15.02■□□□□ -0
RETREG3-208ENST00000589797 TTC8Q8TAM2 541 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 SLC26A7Q8TE54 656 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 TMPRSS4Q9NRS4 437 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 FAM105AQ9NUU6 356 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 L3MBTL1Q9Y468 752 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 PCDHB7Q9Y5E2 793 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 ARHGEF6Q15052 776 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 DDR2Q16832 855 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 DDX1Q92499 740 aaKnown RBP15.02■□□□□ -0
RETREG3-208ENST00000589797 PIWIL1Q96J94 861 aaKnown RBP15.02■□□□□ -0
RETREG3-208ENST00000589797 SDCBP2Q9H190 292 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 ETNK2Q9NVF9 386 aa15.02■□□□□ -0
RETREG3-208ENST00000589797 AIM2O14862 343 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 SH3BP5O60239 455 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 GMNNO75496 209 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 XPAP23025 273 aaPredicted RBP15.02□□□□□ -0.01
RETREG3-208ENST00000589797 SPRP35270 261 aaPredicted RBP15.02□□□□□ -0.01
RETREG3-208ENST00000589797 ALDH7A1P49419 539 aaKnown RBP15.02□□□□□ -0.01
RETREG3-208ENST00000589797 TUBP50607 506 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 TPD52P55327 224 aaPredicted RBP15.02□□□□□ -0.01
RETREG3-208ENST00000589797 CUL3Q13618 768 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 NOL9Q5SY16 702 aaKnown RBP15.02□□□□□ -0.01
RETREG3-208ENST00000589797 PCDH18Q9HCL0 1135 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 GRID1Q9ULK0 1009 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 MYBPHLA2RUH7 354 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 ZWINTO95229 277 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 EDN1P05305 212 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 ERCC2P18074 760 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 CLCNKBP51801 687 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 AQP5P55064 265 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 CCL23P55773 120 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 B3GNT9Q6UX72 402 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 MAGEB18Q96M61 343 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 SRPK1Q96SB4 655 aaKnown RBP15.02□□□□□ -0.01
RETREG3-208ENST00000589797 MECRQ9BV79 373 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 POPDC2Q9HBU9 364 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 SIX4Q9UIU6 781 aa15.02□□□□□ -0.01
RETREG3-208ENST00000589797 PAPSS1O43252 624 aaPredicted RBP15.01□□□□□ -0.01
RETREG3-208ENST00000589797 FNBP1LQ5T0N5 605 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 RGMBQ6NW40 437 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 LAYNQ6UX15 382 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 PACS2Q86VP3 889 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 SH3GL2Q99962 352 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 C4AP0C0L4 1744 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 SKAP2O75563 359 aaPredicted RBP15.01□□□□□ -0.01
RETREG3-208ENST00000589797 VAPBO95292 243 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 POLNQ7Z5Q5 900 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 PTAR1Q7Z6K3 402 aaPredicted RBP15.01□□□□□ -0.01
RETREG3-208ENST00000589797 DCP1BQ8IZD4 617 aaKnown RBP15.01□□□□□ -0.01
RETREG3-208ENST00000589797 RIBC1Q8N443 379 aaPredicted RBP15.01□□□□□ -0.01
RETREG3-208ENST00000589797 FICDQ9BVA6 458 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 RHOBTB2Q9BYZ6 727 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 MUC3BQ9H195 1237 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 NOP53Q9NZM5 478 aaKnown RBP15.01□□□□□ -0.01
RETREG3-208ENST00000589797 CEP290O15078 2479 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 MSI1O43347 362 aaKnown RBP15.01□□□□□ -0.01
RETREG3-208ENST00000589797 NUDT17P0C025 328 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 ITGA9Q13797 1035 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 ANKRD20A2Q5SQ80 823 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 ANKRD20A1Q5TYW2 823 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 LRRC38Q5VT99 294 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 PRPF39Q86UA1 669 aaKnown RBP15.01□□□□□ -0.01
RETREG3-208ENST00000589797 ZNF75CPQ92670 426 aaPredicted RBP15.01□□□□□ -0.01
RETREG3-208ENST00000589797 WNT8BQ93098 351 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 APBA2Q99767 749 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 TRIM56Q9BRZ2 755 aaKnown RBP15.01□□□□□ -0.01
RETREG3-208ENST00000589797 HERPUD2Q9BSE4 406 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 WWP1Q9H0M0 922 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 ZCWPW1Q9H0M4 648 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 ARHGEF38Q9NXL2 777 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 ADA2Q9NZK5 511 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 PPME1Q9Y570 386 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 TRPV2Q9Y5S1 764 aa15.01□□□□□ -0.01
RETREG3-208ENST00000589797 ZC3H4Q9UPT8 1303 aaKnown RBP15.01□□□□□ -0.01
RETREG3-208ENST00000589797 MYO18AQ92614 2054 aaKnown RBP15□□□□□ -0.01
RETREG3-208ENST00000589797 GFAPP14136 432 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 PLK1P53350 603 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 LILRA4P59901 499 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 RAB6CQ53S08 254 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 UBAP2Q5T6F2 1119 aaKnown RBP15□□□□□ -0.01
RETREG3-208ENST00000589797 LCLAT1Q6UWP7 414 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 RAB44Q7Z6P3 723 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms