RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 UBAP2LQ14157 1087 aaKnown RBP12.6□□□□□ -0.39
LRFN3-204ENST00000588831 TAF12Q16514 161 aa12.6□□□□□ -0.39
LRFN3-204ENST00000588831 CIAPIN1Q6FI81 312 aa12.6□□□□□ -0.39
LRFN3-204ENST00000588831 SPATA18Q8TC71 538 aa12.6□□□□□ -0.39
LRFN3-204ENST00000588831 SLC39A3Q9BRY0 314 aa12.6□□□□□ -0.39
LRFN3-204ENST00000588831 STK24Q9Y6E0 443 aa12.6□□□□□ -0.39
LRFN3-204ENST00000588831 ANKRD12Q6UB98 2062 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.59□□□□□ -0.39
LRFN3-204ENST00000588831 E5RJQ4 531 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 GOLGA8TH3BQL2 631 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 CDK4P11802 303 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 ARL4CP56559 192 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 RELAQ04206 551 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 FOLH1Q04609 750 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 Q3C1V9 767 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 PPP2R2DQ66LE6 453 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 SNRNP48Q6IEG0 339 aaKnown RBP12.59□□□□□ -0.39
LRFN3-204ENST00000588831 CES3Q6UWW8 571 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 UNC5BQ8IZJ1 945 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 ATP2A3Q93084 1043 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 RIT2Q99578 217 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 SACM1LQ9NTJ5 587 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 STX18Q9P2W9 335 aaKnown RBP12.59□□□□□ -0.39
LRFN3-204ENST00000588831 PCDHA10Q9Y5I2 948 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 INO80B-WBP1J3KQ70 363 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 COPEO14579 308 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 HMGCS2P54868 508 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 GEMIN4P57678 1058 aaKnown RBP12.59□□□□□ -0.39
LRFN3-204ENST00000588831 NOMO3P69849 1222 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 PDAP1Q13442 181 aaKnown RBP12.59□□□□□ -0.39
LRFN3-204ENST00000588831 SLC15A2Q16348 729 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 ZCCHC9Q8N567 271 aaKnown RBP12.59□□□□□ -0.39
LRFN3-204ENST00000588831 OSCP1Q8WVF1 389 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 TRAPPC12Q8WVT3 735 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 SKA1Q96BD8 255 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 SERAC1Q96JX3 654 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 CCDC138Q96M89 665 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 SLITRK1Q96PX8 696 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 TUBB6Q9BUF5 446 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 INO80BQ9C086 356 aaPredicted RBP12.59□□□□□ -0.39
LRFN3-204ENST00000588831 CCDC68Q9H2F9 335 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 PARVAQ9NVD7 372 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 SEPT10Q9P0V9 454 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 TMEM221A6NGB7 291 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 FCHO1O14526 889 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 LYPLA1O75608 230 aaPredicted RBP12.59□□□□□ -0.39
LRFN3-204ENST00000588831 GABBR2O75899 941 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 TMEM63AO94886 807 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 SEMA3DO95025 777 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 RAG1P15918 1043 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 VARSP26640 1264 aaKnown RBP12.59□□□□□ -0.39
LRFN3-204ENST00000588831 FSTL1Q12841 308 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 BTG3Q14201 252 aaPredicted RBP12.59□□□□□ -0.39
LRFN3-204ENST00000588831 RASA2Q15283 850 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 CHI3L2Q15782 390 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 NRF1Q16656 503 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 TMTC4Q5T4D3 741 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 RNF43Q68DV7 783 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 DLK2Q6UY11 383 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 ASRGL1Q7L266 308 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 ABRAQ8N0Z2 381 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 WRNIP1Q96S55 665 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 EHD1Q9H4M9 534 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 STRIP2Q9ULQ0 834 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 PPM1HQ9ULR3 514 aa12.59□□□□□ -0.39
LRFN3-204ENST00000588831 CCRL2O00421 344 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 NR3C2P08235 984 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 COL6A2P12110 1019 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 RFX1P22670 979 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 RPL22P35268 128 aaKnown RBP12.58□□□□□ -0.4
LRFN3-204ENST00000588831 TRPC1P48995 793 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 GPC3P51654 580 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 PGGT1BP53609 377 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 VCPP55072 806 aaKnown RBP12.58□□□□□ -0.4
LRFN3-204ENST00000588831 CDH6P55285 790 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 PGM5Q15124 567 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 C15orf59Q2T9L4 293 aaPredicted RBP12.58□□□□□ -0.4
LRFN3-204ENST00000588831 PDCD4Q53EL6 469 aaKnown RBP12.58□□□□□ -0.4
LRFN3-204ENST00000588831 PRR23BQ6ZRT6 265 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 DEPDC4Q8N2C3 294 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 C10orf82Q8WW14 230 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 HAUS8Q9BT25 410 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 MAGEB5Q9BZ81 275 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 COL22A1Q8NFW1 1626 aaPredicted RBP12.58□□□□□ -0.4
LRFN3-204ENST00000588831 EGFRP00533 1210 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 KRT3P12035 628 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 MAN1A1P33908 653 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 CD97P48960 835 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 GTF2A2P52657 109 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 TPTEP56180 551 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 SLC25A3Q00325 362 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 CXCL9Q07325 125 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 TRAF2Q12933 501 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 PDK4Q16654 411 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 FAM160B2Q86V87 743 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 SLC9A9Q8IVB4 645 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 SULF1Q8IWU6 871 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 RPAP3Q9H6T3 665 aaPredicted RBP12.58□□□□□ -0.4
LRFN3-204ENST00000588831 INIPQ9NRY2 104 aa12.58□□□□□ -0.4
LRFN3-204ENST00000588831 AQP5P55064 265 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms