RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	OR52E8	Q6IFG1	317 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DPY19L2	Q6NUT2	758 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SLC26A9	Q7LBE3	791 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TMEM237	Q96Q45	408 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	UBE2O	Q9C0C9	1292 aa	Known RBP	13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	VCX	Q9H320	206 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DCTN4	Q9UJW0	460 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	RRN3P2	A6NIE6	340 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZNF487	B1APH4	448 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	GPR32	O75388	356 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	FAM155B	O75949	473 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	RECQL4	O94761	1208 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	C1QA	P02745	245 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DHRS4L1	P0CG22	281 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	LCP1	P13796	627 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ACADS	P16219	412 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	AKAP5	P24588	427 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ETV4	P43268	484 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	BCAT1	P54687	386 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DYNC1I2	Q13409	638 aa	Known RBP	13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SLC45A4	Q5BKX6	768 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZNF449	Q6P9G9	518 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SH2D5	Q6ZV89	423 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	VPS52	Q8N1B4	723 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ANKRD52	Q8NB46	1076 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PHC3	Q8NDX5	983 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZNF398	Q8TD17	642 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PPP1R13L	Q8WUF5	828 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TTC17	Q96AE7	1141 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	IFT43	Q96FT9	208 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	MAML3	Q96JK9	1138 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CNTN3	Q9P232	1028 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	AP4E1	Q9UPM8	1137 aa		13.68	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PLXNB2	O15031	1838 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TRIM49D1	C9J1S8	452 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	BTBD19	C9JJ37	291 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	FAM163B	P0C2L3	166 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TAF1B	Q53T94	588 aa	Predicted RBP	13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	FBXO47	Q5MNV8	452 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	GPR142	Q7Z601	462 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TSSK1B	Q9BXA7	367 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ABHD16B	Q9H3Z7	469 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZFP69B	Q9UJL9	534 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	GJD2	Q9UKL4	321 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	UBQLN1	Q9UMX0	589 aa	Known RBP	13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CXorf49	A8MYA2	514 aa	Predicted RBP	13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	KRT37	O76014	449 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	METTL18	O95568	372 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZFX	P17010	805 aa	Predicted RBP	13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	MAGEA8	P43361	318 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SLC10A2	Q12908	348 aa	Predicted RBP	13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TSNAXIP1	Q2TAA8	658 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ALKAL1	Q6UXT8	129 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	C4orf22	Q6V702	233 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CHSY1	Q86X52	802 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CCDC33	Q8N5R6	958 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	MCU	Q8NE86	351 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	KBTBD7	Q8WVZ9	684 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DNAJC9	Q8WXX5	260 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CENPI	Q92674	756 aa	Predicted RBP	13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	LRRC39	Q96DD0	335 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DTNBP1	Q96EV8	351 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TRIM55	Q9BYV6	548 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	MAGEB5	Q9BZ81	275 aa		13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	IQCG	Q9H095	443 aa	Known RBP	13.67	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CCL15-CCL14	A0A0B4J2E2	113 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377		A0A0G2JND7	137 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SLC15A5	A6NIM6	579 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	COPE	O14579	308 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TRDMT1	O14717	391 aa	Known RBP	13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZSCAN9	O15535	394 aa	Predicted RBP	13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CBX6	O95503	412 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SNRPA	P09012	282 aa	Known RBP	13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	T-ENOL	P0DO92	83 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PRKCH	P24723	683 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	LMO2	P25791	158 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	GNL1	P36915	607 aa	Predicted RBP	13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CDC42EP1	Q00587	391 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CCL15	Q16663	113 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	KCNT2	Q6UVM3	1135 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	MTDH	Q86UE4	582 aa	Known RBP	13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	RFWD2	Q8NHY2	731 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	INPP5D	Q92835	1189 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CSPG4P5	Q96PW8	444 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TINF2	Q9BSI4	451 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZNF408	Q9H9D4	720 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PLAC1	Q9HBJ0	212 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZNF180	Q9UJW8	692 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	MAD1L1	Q9Y6D9	718 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	KPNA7	A9QM74	516 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ADCY6	O43306	1168 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	GCAT	O75600	419 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	APOE	P02649	317 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DARS	P14868	501 aa	Known RBP	13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	GM2A	P17900	193 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PTDSS1	P48651	473 aa	Known RBP	13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	NR2C2	P49116	596 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms