RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 SNCBQ16143 134 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 FAM47CQ5HY64 1035 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SLC9A4Q6AI14 798 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 B3GALNT2Q8NCR0 500 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ARMC2Q8NEN0 867 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 APPL2Q8NEU8 664 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SHKBP1Q8TBC3 707 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 AGAP11Q8TF27 550 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ZC3H15Q8WU90 426 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CRTAC1Q9NQ79 661 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CNTN3Q9P232 1028 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 FAM237BA0A1B0GVD1 139 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 A6NJR5 290 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 YJEFN3A6XGL0 299 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 E7ENQ6 273 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 M0QYT0 321 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 INHBAP08476 426 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 C6orf222P0C671 652 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 GHRP10912 638 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 MRPS5P82675 430 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 POU5F1BQ06416 359 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 BST2Q10589 180 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SEPT7Q16181 437 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 DCAF4L1Q3SXM0 396 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ATG14Q6ZNE5 492 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ALYREFQ86V81 257 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 TDRPQ86YL5 185 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 NME8Q8N427 588 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 TRPV1Q8NER1 839 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 MAF1Q9H063 256 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 KRT82Q9NSB4 513 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 MORF4L1Q9UBU8 362 aa11.07□□□□□ -0.64
CDK5RAP3-225ENST00000582482 STK25O00506 426 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 POMCP01189 267 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 FYNP06241 537 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 MGAT1P26572 445 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PSMB4P28070 264 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 EPHB2P29323 1055 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PPM1JQ5JR12 505 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ZNF410Q86VK4 478 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 VSIG1Q86XK7 387 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ANKRD52Q8NB46 1076 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 GSTCDQ8NEC7 633 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 FBXO27Q8NI29 283 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SLC7A14Q8TBB6 771 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SLC44A1Q8WWI5 657 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ATP2A3Q93084 1043 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 C11orf84Q9BUA3 381 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ULBP1Q9BZM6 244 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 RXFP1Q9HBX9 757 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ARHGEF4Q9NR80 690 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ZNF358Q9NW07 568 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 NKX1-2Q9UD57 310 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 COL1A2P08123 1366 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 STRNO43815 780 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 MGRN1O60291 552 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 LYPLA1O75608 230 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 GM2AP17900 193 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PHBP35232 272 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SCNN1GP51170 649 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 TFDP2Q14188 446 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PPP2R5DQ14738 602 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 RFWD3Q6PCD5 774 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CLEC20AQ6ZU45 233 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SH2D5Q6ZV89 423 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 PCGF5Q86SE9 256 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 NPWQ8N729 165 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CELF6Q96J87 481 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SRPK1Q96SB4 655 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CYTH2Q99418 400 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SLC24A2Q9UI40 661 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 EFR3BQ9Y2G0 817 aa11.06□□□□□ -0.64
CDK5RAP3-225ENST00000582482 H0Y3Z8 333 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 DPYSL4O14531 572 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ITGB1P05556 798 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 ERVK-10P10266 1014 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 BRCC3P46736 316 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 TKTL1P51854 596 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 HUNKP57058 714 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 HSF5Q4G112 596 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 BOLA3Q53S33 107 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 IQSEC1Q6DN90 963 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 NLRP9Q7RTR0 991 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 TTC8Q8TAM2 541 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 USP33Q8TEY7 942 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 SIGLEC10Q96LC7 697 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 UNKQ9C0B0 810 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 MANSC1Q9H8J5 431 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 AGO3Q9H9G7 860 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 DDX43Q9NXZ2 648 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.05□□□□□ -0.644e-8■□□□□ 8
CDK5RAP3-225ENST00000582482 UBQLN1Q9UMX0 589 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 INPP5FQ9Y2H2 1132 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 USP3Q9Y6I4 520 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 IKBKGQ9Y6K9 419 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 NRCAMQ92823 1304 aa11.05□□□□□ -0.64
CDK5RAP3-225ENST00000582482 MBLAC1A4D2B0 266 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-225ENST00000582482 CFAP69A5D8W1 941 aa11.04□□□□□ -0.64
CDK5RAP3-225ENST00000582482 RNF103O00237 685 aa11.04□□□□□ -0.64
CDK5RAP3-225ENST00000582482 HUS1O60921 280 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms