RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-213	ENST00000581523	AFAP1L1	Q8TED9	768 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	FNIP1	Q8TF40	1166 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	HERPUD2	Q9BSE4	406 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	KATNAL1	Q9BW62	490 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	UNK	Q9C0B0	810 aa	Known RBP	4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	L2HGDH	Q9H9P8	463 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	KCNK12	Q9HB15	430 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	ZFP64	Q9NPA5	681 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	TMEM140	Q9NV12	185 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	ING3	Q9NXR8	418 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	CTNNA3	Q9UI47	895 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	MAD2L2	Q9UI95	211 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	PNMA2	Q9UL42	364 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	PCDHA1	Q9Y5I3	950 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	MTCH2	Q9Y6C9	303 aa		4.88	□□□□□ -1.63
MSI2-213	ENST00000581523	SCO2	A0A1W2PP80	73 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	hCG_1642624	A0A1W2PR95	340 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	ERICH2	A1L162	156 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523		F5H423	210 aa	Predicted RBP	4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	DDX3X	O00571	662 aa	Known RBP eCLIP	4.87	□□□□□ -1.63	1e-8	■■□□□ 12.1
MSI2-213	ENST00000581523	KPNA5	O15131	536 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	CYTH3	O43739	400 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	GPR32	O75388	356 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	ITGA10	O75578	1167 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	BAIAP3	O94812	1187 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	PLEKHA8P1	O95397	391 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	LGALS2	P05162	132 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	POLR2M	P0CAP2	368 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	SMIM10L2A	P0DMW4	78 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	SMIM10L2B	P0DMW5	78 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	TNFSF4	P23510	183 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	CCND2	P30279	289 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	SP2	Q02086	613 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	TRDN	Q13061	729 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	RAPGEF1	Q13905	1077 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	GPNMB	Q14956	572 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	CNGA2	Q16280	664 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	UBE2S	Q16763	222 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	FLYWCH1	Q4VC44	716 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	CNKSR3	Q6P9H4	555 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	FAM90A1	Q86YD7	464 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	SH2D3C	Q8N5H7	860 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	PPTC7	Q8NI37	304 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	GCDH	Q92947	438 aa	Predicted RBP	4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	ATP6V0A1	Q93050	837 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	ZBTB10	Q96DT7	871 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	PGBD1	Q96JS3	809 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	MSLNL	Q96KJ4	702 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	MRGPRX1	Q96LB2	322 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	SIGLEC10	Q96LC7	697 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	IWS1	Q96ST2	819 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	C17orf80	Q9BSJ5	609 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	COLEC11	Q9BWP8	271 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	SEZ6L	Q9BYH1	1024 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	LRRC2	Q9BYS8	371 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	WDR12	Q9GZL7	423 aa	Known RBP	4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	OR10A2	Q9H208	303 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	LDAH	Q9H6V9	325 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	MLXIP	Q9HAP2	919 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	ARFGAP3	Q9NP61	516 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	SARS2	Q9NP81	518 aa	Known RBP	4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	CORO2B	Q9UQ03	480 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	RBM8A	Q9Y5S9	174 aa	Known RBP	4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	SNX13	Q9Y5W8	968 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	TRANK1	O15050	2925 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	RALGAPA2	Q2PPJ7	1873 aa		4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	BAZ2B	Q9UIF8	2168 aa	Known RBP	4.87	□□□□□ -1.63
MSI2-213	ENST00000581523	CCDC189	A1A4V9	331 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	C17orf102	A2RUQ5	167 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	LINC01553	A4QN01	128 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	KIF28P	B7ZC32	967 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523		E7EWF7	191 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	HAS3	O00219	553 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	TBX3	O15119	743 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	TEX33	O43247	280 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	LPXN	O60711	386 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	JUN	P05412	331 aa	Known RBP	4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	VSIG10L2	P0DP72	767 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	KIT	P10721	976 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	GHR	P10912	638 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	CHML	P26374	656 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	PCSK1	P29120	753 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	SLC7A1	P30825	629 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	ADCY7	P51828	1080 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	ARFIP2	P53365	341 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	DUSP2	Q05923	314 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	DLX2	Q07687	328 aa	Predicted RBP	4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	SP140	Q13342	867 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	TRIM71	Q2Q1W2	868 aa	Known RBP	4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	GAGE13	Q4V321	117 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	FAM209B	Q5JX69	171 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	CELF3	Q5SZQ8	465 aa	Known RBP	4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	EMC10	Q5UCC4	262 aa		4.86	□□□□□ -1.63
MSI2-213	ENST00000581523	AGBL4	Q5VU57	503 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms