RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 UBE2OQ9C0C9 1292 aaKnown RBP8.29□□□□□ -1.08
KPNB1-210ENST00000580573 DDX47Q9H0S4 455 aaKnown RBP8.29□□□□□ -1.08
KPNB1-210ENST00000580573 ANLNQ9NQW6 1124 aa8.29□□□□□ -1.08
KPNB1-210ENST00000580573 HOMER3Q9NSC5 361 aa8.29□□□□□ -1.08
KPNB1-210ENST00000580573 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.29□□□□□ -1.08
KPNB1-210ENST00000580573 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.29□□□□□ -1.08
KPNB1-210ENST00000580573 OSER1Q9NX31 292 aa8.29□□□□□ -1.08
KPNB1-210ENST00000580573 ARHGEF38Q9NXL2 777 aa8.29□□□□□ -1.08
KPNB1-210ENST00000580573 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.29□□□□□ -1.08
KPNB1-210ENST00000580573 DMGDHQ9UI17 866 aaKnown RBP8.29□□□□□ -1.08
KPNB1-210ENST00000580573 FBXW11Q9UKB1 542 aa8.29□□□□□ -1.08
KPNB1-210ENST00000580573 FZD10Q9ULW2 581 aa8.29□□□□□ -1.08
KPNB1-210ENST00000580573 SLC27A5Q9Y2P5 690 aa8.29□□□□□ -1.08
KPNB1-210ENST00000580573 YIPF1Q9Y548 306 aa8.29□□□□□ -1.08
KPNB1-210ENST00000580573 V9GYY5 206 aaPredicted RBP8.29□□□□□ -1.08
KPNB1-210ENST00000580573 NUP210Q8TEM1 1887 aaPredicted RBP8.29□□□□□ -1.08
KPNB1-210ENST00000580573 LAMA3Q16787 3333 aa8.29□□□□□ -1.08
KPNB1-210ENST00000580573 PDE4DIPQ5VU43 2346 aa8.29□□□□□ -1.08
KPNB1-210ENST00000580573 A0A1W2PQH9 124 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 CFAP99D6REC4 459 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 APOC4-APOC2K7ER74 178 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 RAD51CO43502 376 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 ARHGEF15O94989 841 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 TJP3O95049 919 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 IGLV3-27P01718 113 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 APOC2P02655 101 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 CNPP09543 421 aaKnown RBP8.28□□□□□ -1.08
KPNB1-210ENST00000580573 NCAM1P13591 858 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 YWHAQP27348 245 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 ADRA1BP35368 520 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 CETN2P41208 172 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 MAGEA10P43363 369 aaPredicted RBP8.28□□□□□ -1.08
KPNB1-210ENST00000580573 HCAR3P49019 387 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 TUBP50607 506 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 CDR1P51861 262 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 NRG1Q02297 640 aaPredicted RBP8.28□□□□□ -1.08
KPNB1-210ENST00000580573 CAMK1Q14012 370 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 PPP2R5DQ14738 602 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 OASLQ15646 514 aaKnown RBP8.28□□□□□ -1.08
KPNB1-210ENST00000580573 CA9Q16790 459 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 MGAT5BQ3V5L5 792 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 BRMS1LQ5PSV4 323 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 COL13A1Q5TAT6 717 aaPredicted RBP8.28□□□□□ -1.08
KPNB1-210ENST00000580573 MANEALQ5VSG8 457 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 C8orf74Q6P047 294 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 TTC27Q6P3X3 843 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 KLHDC10Q6PID8 442 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 THSD4Q6ZMP0 1018 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 MAP7D3Q8IWC1 876 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 PQLC3Q8N755 202 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 PDZD8Q8NEN9 1154 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 SLC35B2Q8TB61 432 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 SPPL3Q8TCT6 385 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 HDAC7Q8WUI4 952 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 ACSF2Q96CM8 615 aaPredicted RBP8.28□□□□□ -1.08
KPNB1-210ENST00000580573 POM121Q96HA1 1249 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 RNF157Q96PX1 679 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 KRT12Q99456 494 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 GDF15Q99988 308 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 DCLK3Q9C098 648 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 ZWILCHQ9H900 591 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 GDF3Q9NR23 364 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 KLHL11Q9NVR0 708 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 GMIPQ9P107 970 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 STIM2Q9P246 746 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 PCSK1NQ9UHG2 260 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 MTUS1Q9ULD2 1270 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 AP4E1Q9UPM8 1137 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 NEU3Q9UQ49 428 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 R3HDM2Q9Y2K5 976 aaKnown RBP8.28□□□□□ -1.08
KPNB1-210ENST00000580573 NEU2Q9Y3R4 380 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 PCDHB3Q9Y5E6 796 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 PCDHA11Q9Y5I1 949 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 INSL5Q9Y5Q6 135 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 NUP205Q92621 2012 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 C2orf16Q68DN1 1984 aa8.28□□□□□ -1.08
KPNB1-210ENST00000580573 NYNRINQ9P2P1 1898 aaKnown RBP8.28□□□□□ -1.08
KPNB1-210ENST00000580573 KIF26AQ9ULI4 1882 aaPredicted RBP8.28□□□□□ -1.08
KPNB1-210ENST00000580573 CCDC151A5D8V7 595 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 FAM187AA6NFU0 413 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 C2orf71A6NGG8 1288 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 KCNU1A8MYU2 1149 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 PI4K2BG5E9Z4 385 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 C2CD2LO14523 706 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 CAPN9O14815 690 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 SOAT2O75908 522 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 OLFM2O95897 454 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 POU2F2P09086 479 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 CSH1P0DML2 217 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 CSH2P0DML3 217 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 KRT10P13645 584 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 DNAJB1P25685 340 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 HOXC13P31276 330 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 HTR7P34969 479 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 CTNNB1P35222 781 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 COILP38432 576 aaPredicted RBP8.27□□□□□ -1.09
KPNB1-210ENST00000580573 SSR1P43307 286 aaKnown RBP8.27□□□□□ -1.09
KPNB1-210ENST00000580573 PPP3CCP48454 512 aa8.27□□□□□ -1.09
KPNB1-210ENST00000580573 DRG2P55039 364 aaKnown RBP8.27□□□□□ -1.09
KPNB1-210ENST00000580573 CDH6P55285 790 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms