RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 CSNK1EP49674 416 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ACADVLP49748 655 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 RBP5P82980 135 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TFAMQ00059 246 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TARDBPQ13148 414 aaKnown RBP eCLIP7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SLC39A14Q15043 492 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 STK38Q15208 465 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TMEM119Q4V9L6 283 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 CCDC157Q569K6 752 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 HECTD3Q5T447 861 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 HES3Q5TGS1 186 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 BROXQ5VW32 411 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 DTHD1Q6ZMT9 781 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 HTR3DQ70Z44 454 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TMPRSS6Q8IU80 811 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 KRI1Q8N9T8 703 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 LINC00301Q8NCQ3 95 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 MYCBPAPQ8TBZ2 947 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 PRCCQ92733 491 aaPredicted RBP7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 LGMNQ99538 433 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 BBS2Q9BXC9 721 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 GDPD2Q9HCC8 539 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 TM9SF3Q9HD45 589 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.59□□□□□ -1.193e-6■■■■■ 28.8
CDK5RAP3-209ENST00000578663 FBXO2Q9UK22 296 aaPredicted RBP7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 FBXO10Q9UK96 956 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 SLC27A6Q9Y2P4 619 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 ATP6V1DQ9Y5K8 247 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 NBEAL1Q6ZS30 2694 aa7.59□□□□□ -1.19
CDK5RAP3-209ENST00000578663 MYH10P35580 1976 aa7.59□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ARID1BQ8NFD5 2236 aaPredicted RBP7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FAM92AA1XBS5 289 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 VWA3AA6NCI4 1184 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SPTLC2O15270 562 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 HCRTO43612 131 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GREM1O60565 184 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ATP2C2O75185 946 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 DXOO77932 396 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 YEATS4O95619 227 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FAM163BP0C2L3 166 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CISD3P0C7P0 127 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ZDHHC11BP0C7U3 371 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ACADMP11310 421 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PLCG1P19174 1290 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ACO1P21399 889 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CD27P26842 260 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PCBP4P57723 403 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PSMC1P62191 440 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 KRT85P78386 507 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CYP27A1Q02318 531 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 VAC14Q08AM6 782 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 EIF4HQ15056 248 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ATL3Q6DD88 541 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SRRM1Q8IYB3 904 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 NUP93Q8N1F7 819 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 MYCT1Q8N699 235 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 DCBLD1Q8N8Z6 715 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 UCMAQ8WVF2 138 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 POMGNT1Q8WZA1 660 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FBXO32Q969P5 355 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 NAF1Q96HR8 494 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 HIC2Q96JB3 615 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CDK5RAP3Q96JB5 506 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CNDP2Q96KP4 475 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ZNF578Q96N58 590 aaPredicted RBP7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CLIC6Q96NY7 704 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FBRSQ9HAH7 460 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 COMMD8Q9NX08 183 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 IL37Q9NZH6 218 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 THAP10Q9P2Z0 257 aaPredicted RBP7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SIX4Q9UIU6 781 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 RCOR1Q9UKL0 485 aa7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 MORC2Q9Y6X9 1032 aaPredicted RBP7.58□□□□□ -1.2
CDK5RAP3-209ENST00000578663 NPHP3-ACAD11A0A0J9YXS1 232 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TISP43B9A030 160 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 WASH3PC4AMC7 463 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 VILLO15195 856 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SYNCRIPO60506 623 aaKnown RBP7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PPP6R2O75170 966 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TBCAO75347 108 aaKnown RBP7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TACC1O75410 805 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PPP1R37O75864 691 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 LDOC1O95751 146 aaPredicted RBP7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 LDHAP00338 332 aaKnown RBP7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TMEM191BP0C7N4 346 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 LMO2P25791 158 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 COPAP53621 1224 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FOXK1P85037 733 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ZBTB16Q05516 673 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GOLGA8FQ08AF8 430 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GOLGA8DPQ0D2H9 430 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 IGFBP7Q16270 282 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 LINC00303Q3SY05 128 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ARL6IP4Q66PJ3 421 aaKnown RBP7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 USP49Q70CQ1 688 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GPBP1Q86WP2 473 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CSGALNACT2Q8N6G5 542 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SNX19Q92543 992 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SPATA32Q96LK8 384 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms