RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 UCMAQ8WVF2 138 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 PIWIL1Q96J94 861 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 CIPCQ9C0C6 399 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 PRORYQ9H606 182 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 VRTNQ9H8Y1 702 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 FAM49BQ9NUQ9 324 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 DNMT3LQ9UJW3 386 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 SCML2Q9UQR0 700 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 MYH10P35580 1976 aa10.64□□□□□ -0.71
NPLOC4-220ENST00000576940 CYSRT1A8MQ03 144 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 CBX4O00257 560 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 NPC1O15118 1278 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 TLX3O43711 291 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 VNN1O95497 513 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 JUPP14923 745 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 EIF2S3P41091 472 aaKnown RBP10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 SEMG2Q02383 582 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 NCOA4Q13772 614 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 BMT2Q1RMZ1 405 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 KLHDC10Q6PID8 442 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 CLEC20AQ6ZU45 233 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 GATAD2AQ86YP4 633 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 ZNF366Q8N895 744 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 RBBP8NLQ8NC74 664 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 BIRC7Q96CA5 298 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 TM9SF3Q9HD45 589 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 NAGPAQ9UK23 515 aa10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 AGO1Q9UL18 857 aaKnown RBP10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-220ENST00000576940 LRRIQ3A6PVS8 624 aaPredicted RBP10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 ATXN7O15265 892 aaPredicted RBP10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 EIF3DO15371 548 aaKnown RBP eCLIP10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 KALRNO60229 2985 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 PCDHGA12O60330 932 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 EXOC3O60645 756 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 FSBPO95073 299 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 FAM200BP0CF97 657 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 PLA2G2AP14555 144 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 CASP1P29466 404 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 CHKAP35790 457 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 GRK6P43250 576 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 DLG4P78352 724 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 EFEMP1Q12805 493 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 TEAD4Q15561 434 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 SPOPLQ6IQ16 392 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 SERPINA13PQ6UXR4 307 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 ZNF605Q86T29 641 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 TMPRSS12Q86WS5 348 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 DENND1CQ8IV53 801 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 OR2T3Q8NH03 318 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 DDI1Q8WTU0 396 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 CYB5D2Q8WUJ1 264 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 IGSF8Q969P0 613 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 CYFIP2Q96F07 1278 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 TWNKQ96RR1 684 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 LHX5Q9H2C1 402 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 RASAL2Q9UJF2 1139 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 ZNF510Q9Y2H8 683 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 AK5Q9Y6K8 562 aa10.62□□□□□ -0.71
NPLOC4-220ENST00000576940 TK2O00142 265 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 TSPAN3O60637 253 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 KIF20AO95235 890 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 CORO1AP31146 461 aaKnown RBP10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 CTSKP43235 329 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 GRIA4P48058 902 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 CCT8P50990 548 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 KIF11P52732 1056 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 ASIC1P78348 528 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 COG7P83436 770 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 ARID5AQ03989 594 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 TARDBPQ13148 414 aaKnown RBP eCLIP10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 DNAJC3Q13217 504 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 SLC39A14Q15043 492 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 E2F4Q16254 413 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 SGSM1Q2NKQ1 1148 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 FAM26FQ5R3K3 315 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 LRRC69Q6ZNQ3 347 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 ANKS1BQ7Z6G8 1248 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 ZNF843Q8N446 348 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 PARD3BQ8TEW8 1205 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 USP28Q96RU2 1077 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 HNRNPABQ99729 332 aaKnown RBP10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 ORAI3Q9BRQ5 295 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 BTBD1Q9H0C5 482 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 TNMDQ9H2S6 317 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 SLC39A2Q9NP94 309 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 OSGEPQ9NPF4 335 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 KBTBD4Q9NVX7 518 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 FTSJ1Q9UET6 329 aa10.61□□□□□ -0.71
NPLOC4-220ENST00000576940 A0A1B0GTQ1 180 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 E9PAM4 449 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 TIMM44O43615 452 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 SEMA4FO95754 770 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 RALAP11233 206 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 CD27P26842 260 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 RPS14P62263 151 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 SNRPFP62306 86 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 CLDN10P78369 228 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 CAMK2GQ13555 558 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms