RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ZBED1O96006 694 aa15□□□□□ -0.01
SCARF1-209ENST00000576012 MMP10P09238 476 aa15□□□□□ -0.01
SCARF1-209ENST00000576012 MAP3K21Q5TCX8 1036 aa15□□□□□ -0.01
SCARF1-209ENST00000576012 KLHL35Q6PF15 583 aa15□□□□□ -0.01
SCARF1-209ENST00000576012 HHIPL2Q6UWX4 724 aa15□□□□□ -0.01
SCARF1-209ENST00000576012 TRIM72Q6ZMU5 477 aa15□□□□□ -0.01
SCARF1-209ENST00000576012 BBS12Q6ZW61 710 aa15□□□□□ -0.01
SCARF1-209ENST00000576012 CMC1Q7Z7K0 106 aa15□□□□□ -0.01
SCARF1-209ENST00000576012 TRIM42Q8IWZ5 723 aa15□□□□□ -0.01
SCARF1-209ENST00000576012 UBA3Q8TBC4 463 aa15□□□□□ -0.01
SCARF1-209ENST00000576012 CHURC1Q8WUH1 139 aa15□□□□□ -0.01
SCARF1-209ENST00000576012 TMA16Q96EY4 203 aaKnown RBP15□□□□□ -0.01
SCARF1-209ENST00000576012 CYTH4Q9UIA0 394 aa15□□□□□ -0.01
SCARF1-209ENST00000576012 E7ESA3 106 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 H3BNX3 289 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 TMX2-CTNND1H3BSU7 103 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 EXTL3O43909 919 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 ZNF189O75820 626 aaPredicted RBP14.99□□□□□ -0.01
SCARF1-209ENST00000576012 SEC24DO94855 1032 aaPredicted RBP14.99□□□□□ -0.01
SCARF1-209ENST00000576012 PENKP01210 267 aaPredicted RBP14.99□□□□□ -0.01
SCARF1-209ENST00000576012 FAM163BP0C2L3 166 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 XRCC1P18887 633 aaPredicted RBP14.99□□□□□ -0.01
SCARF1-209ENST00000576012 ETFBP38117 255 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 TEDDM1Q5T9Z0 273 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 KLC3Q6P597 504 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 FBXW8Q8N3Y1 598 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 SNX31Q8N9S9 440 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 CATSPER2Q96P56 530 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 RMDN3Q96TC7 470 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 NGRNQ9NPE2 291 aaKnown RBP14.99□□□□□ -0.01
SCARF1-209ENST00000576012 POLIQ9UNA4 740 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 ZNFX1Q9P2E3 1918 aaKnown RBP14.99□□□□□ -0.01
SCARF1-209ENST00000576012 POLRMTO00411 1230 aaKnown RBP14.99□□□□□ -0.01
SCARF1-209ENST00000576012 TPP1O14773 563 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 TRMUO75648 421 aaKnown RBP14.99□□□□□ -0.01
SCARF1-209ENST00000576012 RPS6P62753 249 aaKnown RBP14.99□□□□□ -0.01
SCARF1-209ENST00000576012 KYAT3Q6YP21 454 aaKnown RBP14.99□□□□□ -0.01
SCARF1-209ENST00000576012 RNF169Q8NCN4 708 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 CCT7Q99832 543 aa14.99□□□□□ -0.01
SCARF1-209ENST00000576012 K7ERI5 159 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 NDC80O14777 642 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 SLC25A11Q02978 314 aaKnown RBP14.98□□□□□ -0.01
SCARF1-209ENST00000576012 DCTN2Q13561 401 aaKnown RBP14.98□□□□□ -0.01
SCARF1-209ENST00000576012 SLC9B1Q4ZJI4 515 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 SLC27A3Q5K4L6 730 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 AAGABQ6PD74 315 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 SNX32Q86XE0 403 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 SPNS2Q8IVW8 549 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 BHLHE22Q8NFJ8 381 aaPredicted RBP14.98□□□□□ -0.01
SCARF1-209ENST00000576012 GAB3Q8WWW8 586 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 CPXM1Q96SM3 734 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 USP18Q9UMW8 372 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 ZNF510Q9Y2H8 683 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 CDK5RAP2Q96SN8 1893 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 HMGCRP04035 888 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 COX4I1P13073 169 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 AOC1P19801 751 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 SOX11P35716 441 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 THOP1P52888 689 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 CBX3Q13185 183 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 TRPC3Q13507 836 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 ANKDD1AQ495B1 522 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 FAM102AQ5T9C2 384 aaPredicted RBP14.98□□□□□ -0.01
SCARF1-209ENST00000576012 ANGEL2Q5VTE6 544 aaKnown RBP14.98□□□□□ -0.01
SCARF1-209ENST00000576012 TMEM198Q66K66 360 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 EXOC8Q8IYI6 725 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 FBXL18Q96ME1 805 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 BLOC1S6Q9UL45 172 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 CTDP1Q9Y5B0 961 aaPredicted RBP14.98□□□□□ -0.01
SCARF1-209ENST00000576012 PSAT1Q9Y617 370 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 LY75O60449 1722 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 SF3B1O75533 1304 aaKnown RBP eCLIP14.98□□□□□ -0.012e-14■■■■■ 172.3
SCARF1-209ENST00000576012 WDR27A2RRH5 827 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 APOEP02649 317 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 PDGFRBP09619 1106 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 SETSIPP0DME0 302 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 EPHA3P29320 983 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 SNAPC2Q13487 334 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 TMEM259Q4ZIN3 620 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 IL31Q6EBC2 164 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 CAND1Q86VP6 1230 aaKnown RBP14.98□□□□□ -0.01
SCARF1-209ENST00000576012 RTKN2Q8IZC4 609 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 VCPIP1Q96JH7 1222 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 OR52B2Q96RD2 323 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 PKP2Q99959 881 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 PLAC1Q9HBJ0 212 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 POPDC2Q9HBU9 364 aa14.98□□□□□ -0.01
SCARF1-209ENST00000576012 KLHL2O95198 593 aa14.97□□□□□ -0.01
SCARF1-209ENST00000576012 KRT7P08729 469 aa14.97□□□□□ -0.01
SCARF1-209ENST00000576012 TUBB3Q13509 450 aa14.97□□□□□ -0.01
SCARF1-209ENST00000576012 OLIG2Q13516 323 aa14.97□□□□□ -0.01
SCARF1-209ENST00000576012 GRM2Q14416 872 aa14.97□□□□□ -0.01
SCARF1-209ENST00000576012 ARHGEF16Q5VV41 709 aa14.97□□□□□ -0.01
SCARF1-209ENST00000576012 THNSL1Q8IYQ7 743 aa14.97□□□□□ -0.01
SCARF1-209ENST00000576012 ZNF781Q8N8C0 355 aa14.97□□□□□ -0.01
SCARF1-209ENST00000576012 DEPTORQ8TB45 409 aa14.97□□□□□ -0.01
SCARF1-209ENST00000576012 PEBP4Q96S96 227 aa14.97□□□□□ -0.01
SCARF1-209ENST00000576012 SSX2IPQ9Y2D8 614 aa14.97□□□□□ -0.01
SCARF1-209ENST00000576012 PMM2O15305 246 aa14.97□□□□□ -0.01
SCARF1-209ENST00000576012 XPOTO43592 962 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms