RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 PRICKLE1Q96MT3 831 aaPredicted RBP9.09□□□□□ -0.95
SMG6-210ENST00000572205 NELL2Q99435 816 aa9.09□□□□□ -0.95
SMG6-210ENST00000572205 VPS16Q9H269 839 aa9.09□□□□□ -0.95
SMG6-210ENST00000572205 LMAN1LQ9HAT1 526 aa9.09□□□□□ -0.95
SMG6-210ENST00000572205 THG1LQ9NWX6 298 aaKnown RBP9.09□□□□□ -0.95
SMG6-210ENST00000572205 HESX1Q9UBX0 185 aa9.09□□□□□ -0.95
SMG6-210ENST00000572205 DNMT3LQ9UJW3 386 aa9.09□□□□□ -0.95
SMG6-210ENST00000572205 FBXO10Q9UK96 956 aa9.09□□□□□ -0.95
SMG6-210ENST00000572205 FBXO4Q9UKT5 387 aa9.09□□□□□ -0.95
SMG6-210ENST00000572205 CLEC4EQ9ULY5 219 aa9.09□□□□□ -0.95
SMG6-210ENST00000572205 SYCE3A1L190 88 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 PRR23AA6NEV1 266 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 TEX33O43247 280 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 THAP12O43422 761 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 RNF40O75150 1001 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 LTFP02788 710 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 CISD3P0C7P0 127 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 ADH5P11766 374 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 KRT5P13647 590 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 LCP1P13796 627 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 CYP11B1P15538 503 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 ATP5C1P36542 298 aaKnown RBP9.08□□□□□ -0.96
SMG6-210ENST00000572205 PBX1P40424 430 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 NOMO3P69849 1222 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 FMO1Q01740 532 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 EFEMP1Q12805 493 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 SYCP1Q15431 976 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 FAM133BQ5BKY9 247 aaKnown RBP9.08□□□□□ -0.96
SMG6-210ENST00000572205 C10orf120Q5SQS8 335 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 SYPL2Q5VXT5 272 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 NADSYN1Q6IA69 706 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 SASS6Q6UVJ0 657 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 SND1Q7KZF4 910 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMG6-210ENST00000572205 BEND5Q7L4P6 421 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 TAC4Q86UU9 113 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 PASD1Q8IV76 773 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 SPEM1Q8N4L4 309 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 SUMF1Q8NBK3 374 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 DQX1Q8TE96 717 aaKnown RBP9.08□□□□□ -0.96
SMG6-210ENST00000572205 BAP1Q92560 729 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 CD101Q93033 1021 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 FAM81BQ96LP2 452 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 SLC2A13Q96QE2 648 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 P2RY13Q9BPV8 354 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 LHX5Q9H2C1 402 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 SPHK2Q9NRA0 654 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 SFMBT1Q9UHJ3 866 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 RASAL2Q9UJF2 1139 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 AGO1Q9UL18 857 aaKnown RBP9.08□□□□□ -0.96
SMG6-210ENST00000572205 MRPS17Q9Y2R5 130 aaKnown RBP9.08□□□□□ -0.96
SMG6-210ENST00000572205 SPEGQ15772 3267 aa9.08□□□□□ -0.96
SMG6-210ENST00000572205 PCDH15Q96QU1 1955 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 A0A1B0GTH6 734 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 IRAK2O43187 625 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 ADAM23O75077 832 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 TULP3O75386 442 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 TFE3P19532 575 aaPredicted RBP9.07□□□□□ -0.96
SMG6-210ENST00000572205 HOXD9P28356 352 aaPredicted RBP9.07□□□□□ -0.96
SMG6-210ENST00000572205 CORO1AP31146 461 aaKnown RBP9.07□□□□□ -0.96
SMG6-210ENST00000572205 HOXA6P31267 233 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 SLC6A4P31645 630 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 GABRB2P47870 512 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 PTP4A2Q12974 167 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 LRRC32Q14392 662 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 TPD52L1Q16890 204 aaPredicted RBP9.07□□□□□ -0.96
SMG6-210ENST00000572205 DGKKQ5KSL6 1271 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 CC2D1AQ6P1N0 951 aaPredicted RBP9.07□□□□□ -0.96
SMG6-210ENST00000572205 TOGARAM2Q6ZUX3 1019 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 FAM183BPQ6ZVS7 135 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 FMNL3Q8IVF7 1028 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 SCUBE3Q8IX30 993 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 SIX6OS1Q8N1H7 587 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 ARHGAP18Q8N392 663 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 SYNPOQ8N3V7 929 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 CPXM2Q8N436 756 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 TERB1Q8NA31 727 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 WFDC5Q8TCV5 224 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 USP33Q8TEY7 942 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 PLD4Q96BZ4 506 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 LMLNQ96KR4 655 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 NAP1L5Q96NT1 182 aaPredicted RBP9.07□□□□□ -0.96
SMG6-210ENST00000572205 STK33Q9BYT3 514 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 LRRC4Q9HBW1 653 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 CBX8Q9HC52 389 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 ANLNQ9NQW6 1124 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 FAM207AQ9NSI2 230 aaPredicted RBP9.07□□□□□ -0.96
SMG6-210ENST00000572205 SPATA6Q9NWH7 488 aaPredicted RBP9.07□□□□□ -0.96
SMG6-210ENST00000572205 MARCH2Q9P0N8 246 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 TBC1D14Q9P2M4 693 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 XPO7Q9UIA9 1087 aaKnown RBP9.07□□□□□ -0.96
SMG6-210ENST00000572205 NAALADL1Q9UQQ1 740 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 R4GN57 208 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 WDFY3Q8IZQ1 3526 aa9.07□□□□□ -0.96
SMG6-210ENST00000572205 RALGAPA1Q6GYQ0 2036 aa9.06□□□□□ -0.96
SMG6-210ENST00000572205 TCRBV5S1A1TA0A578 114 aa9.06□□□□□ -0.96
SMG6-210ENST00000572205 PRRT4C9JH25 899 aa9.06□□□□□ -0.96
SMG6-210ENST00000572205 SLC9A3R1O14745 358 aaPredicted RBP9.06□□□□□ -0.96
SMG6-210ENST00000572205 FBXO21O94952 628 aa9.06□□□□□ -0.96
SMG6-210ENST00000572205 ADH1CP00326 375 aa9.06□□□□□ -0.96
SMG6-210ENST00000572205 CYP1A1P04798 512 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms