RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 PBX4Q9BYU1 374 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 POPDC2Q9HBU9 364 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 SPG21Q9NZD8 308 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 RCOR3Q9P2K3 495 aaPredicted RBP17.99■□□□□ 0.47
RPAIN-208ENST00000571043 AP4E1Q9UPM8 1137 aa17.99■□□□□ 0.47
RPAIN-208ENST00000571043 I3L4J1 428 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 PPM1AP35813 382 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 DAOAP59103 153 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 ROR1Q01973 937 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 ELAVL2Q12926 359 aaKnown RBP17.98■□□□□ 0.47
RPAIN-208ENST00000571043 FUT10Q6P4F1 479 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 RNF168Q8IYW5 571 aaPredicted RBP17.98■□□□□ 0.47
RPAIN-208ENST00000571043 PCDH19Q8TAB3 1148 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 MYLPFQ96A32 169 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 PKMYT1Q99640 499 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 ADAM33Q9BZ11 813 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 ULBP1Q9BZM6 244 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 PHACTR1Q9C0D0 580 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 CENPHQ9H3R5 247 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 PCDHB8Q9UN66 801 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 RWDD3Q9Y3V2 267 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 SF3B1O75533 1304 aaKnown RBP eCLIP17.98■□□□□ 0.47
RPAIN-208ENST00000571043 TRIOBPQ9H2D6 2365 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 CFAP69A5D8W1 941 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 HHLA1C9JL84 531 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 SYN3O14994 580 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 ARHGEF15O94989 841 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 CA3P07451 260 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 PBX2P40425 430 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 NDUFV1P49821 464 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 DCAF6Q58WW2 860 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 OVOS1Q6IE37 1185 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 UNC45BQ8IWX7 931 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 SCML4Q8N228 414 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 IRGQQ8WZA9 623 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 TLCD1Q96CP7 247 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 TMEM169Q96HH4 297 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 DHX35Q9H5Z1 703 aaKnown RBP17.98■□□□□ 0.47
RPAIN-208ENST00000571043 PNPLA8Q9NP80 782 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 MTMR10Q9NXD2 777 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 RRN3Q9NYV6 651 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 FZD10Q9ULW2 581 aa17.98■□□□□ 0.47
RPAIN-208ENST00000571043 YBX2Q9Y2T7 364 aaKnown RBP17.98■□□□□ 0.47
RPAIN-208ENST00000571043 FARP1Q9Y4F1 1045 aaPredicted RBP17.98■□□□□ 0.47
RPAIN-208ENST00000571043 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.97■□□□□ 0.47
RPAIN-208ENST00000571043 C5orf67F2Z3F1 127 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 FGFR3P22607 806 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 CYP2F1P24903 491 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 RPL22P35268 128 aaKnown RBP17.97■□□□□ 0.47
RPAIN-208ENST00000571043 ATXN1P54253 815 aaKnown RBP17.97■□□□□ 0.47
RPAIN-208ENST00000571043 GDF10P55107 478 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 RAB30Q15771 203 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 FAM171A1Q5VUB5 890 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 OTUD1Q5VV17 481 aaPredicted RBP17.97■□□□□ 0.47
RPAIN-208ENST00000571043 DARS2Q6PI48 645 aaKnown RBP17.97■□□□□ 0.47
RPAIN-208ENST00000571043 NPNTQ6UXI9 565 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 DDX53Q86TM3 631 aaKnown RBP17.97■□□□□ 0.47
RPAIN-208ENST00000571043 PPIL6Q8IXY8 311 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 NDRG1Q92597 394 aaKnown RBP17.97■□□□□ 0.47
RPAIN-208ENST00000571043 KCTD15Q96SI1 283 aaPredicted RBP17.97■□□□□ 0.47
RPAIN-208ENST00000571043 RBM15Q96T37 977 aaKnown RBP eCLIP17.97■□□□□ 0.47
RPAIN-208ENST00000571043 VN1R3Q9BXE9 311 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 CAPS2Q9BXY5 557 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 NINJ2Q9NZG7 142 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 BCCIPQ9P287 314 aaKnown RBP eCLIP17.97■□□□□ 0.47
RPAIN-208ENST00000571043 MSRAQ9UJ68 235 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 MYO7AQ13402 2215 aa17.97■□□□□ 0.47
RPAIN-208ENST00000571043 PLXNA4Q9HCM2 1894 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 BCLAF3A2AJT9 711 aaKnown RBP17.96■□□□□ 0.47
RPAIN-208ENST00000571043 TCEA3O75764 348 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 FGF18O76093 207 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 OAZ2O95190 189 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 RB1P06400 928 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 ABHD2P08910 425 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 NR2C2P49116 596 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 AIF1P55008 147 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 TSPY1Q01534 308 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 MRPL58Q14197 206 aaKnown RBP17.96■□□□□ 0.47
RPAIN-208ENST00000571043 PPP6R3Q5H9R7 873 aaPredicted RBP17.96■□□□□ 0.47
RPAIN-208ENST00000571043 C1orf228Q6PIY5 440 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 TAS1R1Q7RTX1 841 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 CCDC185Q8N715 623 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 FAM71DQ8N9W8 422 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 KLHL23Q8NBE8 558 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 PRCCQ92733 491 aaPredicted RBP17.96■□□□□ 0.47
RPAIN-208ENST00000571043 RTP4Q96DX8 246 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 TTC25Q96NG3 672 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 SAMD11Q96NU1 681 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 KCNK16Q96T55 309 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 STMN4Q9H169 189 aaPredicted RBP17.96■□□□□ 0.47
RPAIN-208ENST00000571043 DMAP1Q9NPF5 467 aaPredicted RBP17.96■□□□□ 0.47
RPAIN-208ENST00000571043 STK39Q9UEW8 545 aa17.96■□□□□ 0.47
RPAIN-208ENST00000571043 NOVA2Q9UNW9 492 aaKnown RBP17.96■□□□□ 0.47
RPAIN-208ENST00000571043 TSC2P49815 1807 aa17.96■□□□□ 0.46
RPAIN-208ENST00000571043 A0A1W2PPC1 479 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 H7C0C1 242 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 RASGRF2O14827 1237 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 ZBED1O96006 694 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 AGTP01019 485 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 SOD2P04179 222 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms