RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ZNF234Q14588 700 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 SEZ6Q53EL9 994 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 INTS6LQ5JSJ4 861 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 C20orf194Q5TEA3 1177 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 DENND5BQ6ZUT9 1274 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 TAS1R3Q7RTX0 852 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 IQCHQ86VS3 1027 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 DTX1Q86Y01 620 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 SCN4BQ8IWT1 228 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 SLFN12Q8IYM2 578 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 IFI44Q8TCB0 444 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 P2RY11Q96G91 374 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 ABHD17AQ96GS6 310 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 ZBTB45Q96K62 511 aaPredicted RBP7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 CATSPER2Q96P56 530 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 PYM1Q9BRP8 204 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 UNKQ9C0B0 810 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 FBRSQ9HAH7 460 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 CASS4Q9NQ75 786 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 VPS54Q9P1Q0 977 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 TPX2Q9ULW0 747 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 ENTPD4Q9Y227 616 aa7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 TNRC6AQ8NDV7 1962 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-217ENST00000569429 PTPRJQ12913 1337 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 CROCCQ5TZA2 2017 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 LACTBL1A8MY62 500 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 RIOK3O14730 519 aaKnown RBP7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 TOM1L1O75674 476 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 ABL1P00519 1130 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 DNTTP04053 509 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 CENPBP07199 599 aaPredicted RBP7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 ALPPL2P10696 532 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 PDX1P52945 283 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 GALCP54803 685 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 PPP2R3AQ06190 1150 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 OVGP1Q12889 678 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 KCNJ12Q14500 433 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 DHX8Q14562 1220 aaKnown RBP7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 GEN1Q17RS7 908 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 TTC31Q49AM3 519 aaPredicted RBP7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 USP30Q70CQ3 517 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 HTR3DQ70Z44 454 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 JAMLQ86YT9 394 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 SPATA2LQ8IUW3 424 aaPredicted RBP7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 MCEMP1Q8IX19 187 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 TEX19Q8NA77 164 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 RBBP8NLQ8NC74 664 aaPredicted RBP7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 WDR48Q8TAF3 677 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 RUFY2Q8WXA3 655 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 KIFAP3Q92845 792 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 ARRDC3Q96B67 414 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 CYLDQ9NQC7 956 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 PRDM8Q9NQV8 689 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 GJB4Q9NTQ9 266 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 NLGN3Q9NZ94 848 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 SEL1LQ9UBV2 794 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 ERRFI1Q9UJM3 462 aaPredicted RBP7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 GTF3C4Q9UKN8 822 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 ITGB1BP2Q9UKP3 347 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 PCDHB11Q9Y5F2 797 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 RBM8AQ9Y5S9 174 aaKnown RBP7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 TRPM6Q9BX84 2022 aa7.01□□□□□ -1.29
HERPUD1-217ENST00000569429 FAM47DPA6NHR8 397 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 BAG4O95429 457 aaKnown RBP7□□□□□ -1.29
HERPUD1-217ENST00000569429 RARGP13631 454 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 CD82P27701 267 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 UGT1A5P35504 534 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 TAF6P49848 677 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 CCR5P51681 352 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 MFAP3P55082 362 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 RPS14P62263 151 aaKnown RBP7□□□□□ -1.29
HERPUD1-217ENST00000569429 NOP14P78316 857 aaKnown RBP7□□□□□ -1.29
HERPUD1-217ENST00000569429 AKAP17AQ02040 695 aaKnown RBP7□□□□□ -1.29
HERPUD1-217ENST00000569429 MCL1Q07820 350 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 TAF10Q12962 218 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 EIF4HQ15056 248 aaKnown RBP7□□□□□ -1.29
HERPUD1-217ENST00000569429 PPP1R26Q5T8A7 1209 aaPredicted RBP7□□□□□ -1.29
HERPUD1-217ENST00000569429 NCEH1Q6PIU2 408 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 VSTM1Q6UX27 236 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 SERPINA13PQ6UXR4 307 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 TPGS1Q6ZTW0 290 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 NEK8Q86SG6 692 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 CD302Q8IX05 232 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 BLIDQ8IZY5 108 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 FBXO39Q8N4B4 442 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 CPT1CQ8TCG5 803 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 WBP2Q969T9 261 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 TCTN2Q96GX1 697 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 SERAC1Q96JX3 654 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 NAP1L4Q99733 375 aaKnown RBP7□□□□□ -1.29
HERPUD1-217ENST00000569429 DUSP23Q9BVJ7 150 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 RNF26Q9BY78 433 aaPredicted RBP7□□□□□ -1.29
HERPUD1-217ENST00000569429 LNPKQ9C0E8 428 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 RUBCNLQ9H714 662 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 UCKL1Q9NWZ5 548 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 ELOVL2Q9NXB9 296 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 ARHGAP28Q9P2N2 729 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 SCML1Q9UN30 329 aa7□□□□□ -1.29
HERPUD1-217ENST00000569429 PCDHA12Q9UN75 941 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms