RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 PUS10Q3MIT2 529 aaKnown RBP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 RAB6CQ53S08 254 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 FAM78AQ5JUQ0 283 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 SH3PXD2AQ5TCZ1 1133 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 PTCRAQ6ISU1 281 aaPredicted RBP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 C11orf63Q6NUN7 778 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 SCYL2Q6P3W7 929 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 OTOP3Q7RTS5 596 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 BNIPLQ7Z465 357 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 DAAM2Q86T65 1068 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 DDX42Q86XP3 938 aaKnown RBP eCLIP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 ARID3BQ8IVW6 561 aaPredicted RBP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 CCAR2Q8N163 923 aaKnown RBP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 TDRD5Q8NAT2 981 aaKnown RBP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 TTC16Q8NEE8 873 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 TPCN2Q8NHX9 752 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 KIAA1524Q8TCG1 905 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 SH3RF2Q8TEC5 729 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 CENPIQ92674 756 aaPredicted RBP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 SMARCD2Q92925 531 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 USP13Q92995 863 aaPredicted RBP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 PLD4Q96BZ4 506 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 ACSF2Q96CM8 615 aaPredicted RBP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 ZFRQ96KR1 1074 aaKnown RBP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 ASB16Q96NS5 453 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 NCAPGQ9BPX3 1015 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 KLF16Q9BXK1 252 aaPredicted RBP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 RAB6CQ9H0N0 254 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 KIF9Q9HAQ2 790 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 PRDM6Q9NQX0 595 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 GKN1Q9NS71 199 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 PIGVQ9NUD9 493 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 TDP1Q9NUW8 608 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 TMEM51Q9NW97 253 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 THEGQ9P2T0 379 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 LSM7Q9UK45 103 aaKnown RBP7.99□□□□□ -1.13
SCAPER-221ENST00000568549 ARHGAP26Q9UNA1 814 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 USTQ9Y2C2 406 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 ZKSCAN5Q9Y2L8 839 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 CAPN6Q9Y6Q1 641 aa7.99□□□□□ -1.13
SCAPER-221ENST00000568549 GRID2IPA4D2P6 1211 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 LEFTY2O00292 366 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 SPOPO43791 374 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 LRCH4O75427 683 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 PALMO75781 387 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 STC2O76061 302 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 MOCS2O96007 188 aaPredicted RBP7.98□□□□□ -1.13
SCAPER-221ENST00000568549 IGLV3-27P01718 113 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 APOEP02649 317 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 SLC2A3P11169 496 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 LAMP2P13473 410 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 TCF3P15923 654 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 MIPP30301 263 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 CORO1AP31146 461 aaKnown RBP7.98□□□□□ -1.13
SCAPER-221ENST00000568549 CCR1P32246 355 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 PCK1P35558 622 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 SLC1A1P43005 524 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 SSR1P43307 286 aaKnown RBP7.98□□□□□ -1.13
SCAPER-221ENST00000568549 HARS2P49590 506 aaKnown RBP7.98□□□□□ -1.13
SCAPER-221ENST00000568549 CXCR3P49682 368 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 KCNQ1P51787 676 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 ZXDBP98169 803 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 USP4Q13107 963 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 PPP2R5DQ14738 602 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 SMAD2Q15796 467 aaKnown RBP7.98□□□□□ -1.13
SCAPER-221ENST00000568549 ZNF77Q15935 545 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 HADHQ16836 314 aaKnown RBP7.98□□□□□ -1.13
SCAPER-221ENST00000568549 AAK1Q2M2I8 961 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 ARL13BQ3SXY8 428 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 ZC3H12AQ5D1E8 599 aaKnown RBP7.98□□□□□ -1.13
SCAPER-221ENST00000568549 BRMS1LQ5PSV4 323 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 DAB2IPQ5VWQ8 1189 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 NUGGCQ68CJ6 796 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 CC2D1AQ6P1N0 951 aaPredicted RBP7.98□□□□□ -1.13
SCAPER-221ENST00000568549 FAM131BQ86XD5 332 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 CPNE8Q86YQ8 564 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 UNC45BQ8IWX7 931 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 SYCE1Q8N0S2 351 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 CELF5Q8N6W0 485 aaKnown RBP7.98□□□□□ -1.13
SCAPER-221ENST00000568549 ATP6V0D2Q8N8Y2 350 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 ADAMTS19Q8TE59 1207 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 SLC39A13Q96H72 371 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 FCRL2Q96LA5 508 aaPredicted RBP7.98□□□□□ -1.13
SCAPER-221ENST00000568549 ALS2CR12Q96Q35 445 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 PHF7Q9BWX1 381 aaPredicted RBP7.98□□□□□ -1.13
SCAPER-221ENST00000568549 DCLK3Q9C098 648 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 TKTL2Q9H0I9 626 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 GOLPH3Q9H4A6 298 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 WDCPQ9H6R7 721 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 TRPV4Q9HBA0 871 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 KCND1Q9NSA2 647 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 CFAP97Q9P2B7 532 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 EPS15L1Q9UBC2 864 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 PCSK1NQ9UHG2 260 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 SLC12A6Q9UHW9 1150 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 USP18Q9UMW8 372 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 CCL26Q9Y258 94 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 SH3BP1Q9Y3L3 701 aa7.98□□□□□ -1.13
SCAPER-221ENST00000568549 NR2E1Q9Y466 385 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms