RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ZSWIM5Q9P217 1185 aa3□□□□□ -1.93
CHD9-218ENST00000566029 VPS51Q9UID3 782 aa3□□□□□ -1.93
CHD9-218ENST00000566029 HEMK1Q9Y5R4 338 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 SLX4Q8IY92 1834 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TMEM114B3SHH9 223 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ATP5J2-PTCD1G3V325 749 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SLC22A1O15245 554 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ARHGEF9O43307 516 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PRKAB2O43741 272 aa3□□□□□ -1.93
CHD9-218ENST00000566029 P4HA1P13674 534 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CHRNB2P17787 502 aa3□□□□□ -1.93
CHD9-218ENST00000566029 XPAP23025 273 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 SPAM1P38567 509 aa3□□□□□ -1.93
CHD9-218ENST00000566029 KCNJ1P48048 391 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CPA2P48052 419 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SNAP25P60880 206 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SKP1P63208 163 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SF3B4Q15427 424 aaKnown RBP eCLIP3□□□□□ -1.933e-6■■■■□ 23.3
CHD9-218ENST00000566029 ARHGAP11AQ6P4F7 1023 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SLC30A10Q6XR72 485 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CDH24Q86UP0 819 aa3□□□□□ -1.93
CHD9-218ENST00000566029 RFX6Q8HWS3 928 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ATP6V0D2Q8N8Y2 350 aa3□□□□□ -1.93
CHD9-218ENST00000566029 LEMD2Q8NC56 503 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TSPAN14Q8NG11 270 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TAMM41Q96BW9 452 aa3□□□□□ -1.93
CHD9-218ENST00000566029 RMND5BQ96G75 393 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 KLHL25Q9H0H3 589 aa3□□□□□ -1.93
CHD9-218ENST00000566029 VPS11Q9H270 941 aa3□□□□□ -1.93
CHD9-218ENST00000566029 RPF2Q9H7B2 306 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 ARMT1Q9H993 441 aa3□□□□□ -1.93
CHD9-218ENST00000566029 AKIP1Q9NQ31 210 aa3□□□□□ -1.93
CHD9-218ENST00000566029 EHD3Q9NZN3 535 aa3□□□□□ -1.93
CHD9-218ENST00000566029 FETUBQ9UGM5 382 aa3□□□□□ -1.93
CHD9-218ENST00000566029 APPL1Q9UKG1 709 aa3□□□□□ -1.93
CHD9-218ENST00000566029 UBAP1LF5GYI3 381 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TMX2-CTNND1H3BSU7 103 aa3□□□□□ -1.93
CHD9-218ENST00000566029 MSI1O43347 362 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 IDH3BO43837 385 aa3□□□□□ -1.93
CHD9-218ENST00000566029 LRRN2O75325 713 aa3□□□□□ -1.93
CHD9-218ENST00000566029 NAGAP17050 411 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CIITAP33076 1130 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ETV4P43268 484 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ATG16L1Q676U5 607 aa3□□□□□ -1.93
CHD9-218ENST00000566029 LPCAT2Q7L5N7 544 aa3□□□□□ -1.93
CHD9-218ENST00000566029 VPS39Q96JC1 886 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CSRNP1Q96S65 589 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ZKSCAN3Q9BRR0 538 aa3□□□□□ -1.93
CHD9-218ENST00000566029 BTBD2Q9BX70 525 aa3□□□□□ -1.93
CHD9-218ENST00000566029 VRTNQ9H8Y1 702 aa3□□□□□ -1.93
CHD9-218ENST00000566029 GNPTGQ9UJJ9 305 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ITGA11Q9UKX5 1188 aa3□□□□□ -1.93
CHD9-218ENST00000566029 NOD1Q9Y239 953 aa3□□□□□ -1.93
CHD9-218ENST00000566029 MYH9P35579 1960 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 CENPBD1B2RD01 187 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CLPTM1O96005 669 aa3□□□□□ -1.93
CHD9-218ENST00000566029 XRCC1P18887 633 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 NPY2RP49146 381 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SULT1E1P49888 294 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ARPP19P56211 112 aa3□□□□□ -1.93
CHD9-218ENST00000566029 RSBN1LQ6PCB5 846 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 C14orf80Q86SX3 495 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CARM1Q86X55 608 aa3□□□□□ -1.93
CHD9-218ENST00000566029 IFNL1Q8IU54 200 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ZZZ3Q8IYH5 903 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SUN5Q8TC36 379 aa3□□□□□ -1.93
CHD9-218ENST00000566029 KBTBD7Q8WVZ9 684 aa3□□□□□ -1.93
CHD9-218ENST00000566029 HDAC2Q92769 488 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 AGPAT1Q99943 283 aa3□□□□□ -1.93
CHD9-218ENST00000566029 GAL3ST1Q99999 423 aa3□□□□□ -1.93
CHD9-218ENST00000566029 MANSC1Q9H8J5 431 aa3□□□□□ -1.93
CHD9-218ENST00000566029 KANSL2Q9H9L4 492 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ZSCAN32Q9NX65 697 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PSMC3IPQ9P2W1 217 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 DCTN4Q9UJW0 460 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ZNF335Q9H4Z2 1342 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 SCN4AP35499 1836 aa3□□□□□ -1.93
CHD9-218ENST00000566029 DNALI1O14645 258 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 MT-ND3P03897 115 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ATF4P18848 351 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 TGM1P22735 817 aa3□□□□□ -1.93
CHD9-218ENST00000566029 RAB4BP61018 213 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SUZ12Q15022 739 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 SGO2Q562F6 1265 aa3□□□□□ -1.93
CHD9-218ENST00000566029 KIAA1841Q6NSI8 718 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TUBA3EQ6PEY2 450 aa3□□□□□ -1.93
CHD9-218ENST00000566029 XKR5Q6UX68 686 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ALYREFQ86V81 257 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 CPXCR1Q8N123 301 aa3□□□□□ -1.93
CHD9-218ENST00000566029 RASGRP4Q8TDF6 673 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ACMSDQ8TDX5 336 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TRIB2Q92519 343 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CDKL2Q92772 493 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PINX1Q96BK5 328 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 CNDP2Q96KP4 475 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 ZNF512Q96ME7 567 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 WDR83Q9BRX9 315 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 BRIP1Q9BX63 1249 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PLA2G12BQ9BX93 195 aa3□□□□□ -1.93
CHD9-218ENST00000566029 VTI1BQ9UEU0 232 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms