RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 KCTD13Q8WZ19 329 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 CENPIQ92674 756 aaPredicted RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 COL26A1Q96A83 441 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 TRIM43Q96BQ3 446 aaPredicted RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 RBM41Q96IZ5 413 aaKnown RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 DDX23Q9BUQ8 820 aaKnown RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 SNRNP25Q9BV90 132 aaKnown RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 PRKD2Q9BZL6 878 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 UBXN6Q9BZV1 441 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 CRISPLD1Q9H336 500 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 DHX35Q9H5Z1 703 aaKnown RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 PRDM5Q9NQX1 630 aaPredicted RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 PIGVQ9NUD9 493 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 MARCH5Q9NX47 278 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 DDX56Q9NY93 547 aaKnown RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 ABI2Q9NYB9 513 aaPredicted RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 ADAM28Q9UKQ2 775 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 ATP8A1Q9Y2Q0 1164 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 NEU2Q9Y3R4 380 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 USP3Q9Y6I4 520 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 FNDC1Q4ZHG4 1894 aaPredicted RBP6.47□□□□□ -1.37
CHD9-217ENST00000565832 ADAM12O43184 909 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 ENDOD1O94919 500 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 ZBED1O96006 694 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 IFNB1P01574 187 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 GALTP07902 379 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 FAM163BP0C2L3 166 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 RPL17P18621 184 aaKnown RBP6.47□□□□□ -1.37
CHD9-217ENST00000565832 L1CAMP32004 1257 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 ADCY8P40145 1251 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 ACADSBP45954 432 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 FNTAP49354 379 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 SULT1E1P49888 294 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 DAOAP59103 153 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 C1QTNF8P60827 252 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 SLC10A2Q12908 348 aaPredicted RBP6.47□□□□□ -1.37
CHD9-217ENST00000565832 CUL1Q13616 776 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 ACAP1Q15027 740 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 CLUL1Q15846 466 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 TAZQ16635 292 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 RAB41Q5JT25 222 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 EFHC1Q5JVL4 640 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 RTP2Q5QGT7 225 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 HP1BP3Q5SSJ5 553 aaPredicted RBP6.47□□□□□ -1.37
CHD9-217ENST00000565832 ERMARDQ5T6L9 678 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 EMBQ6PCB8 327 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 PRSS55Q6UWB4 352 aaPredicted RBP6.47□□□□□ -1.37
CHD9-217ENST00000565832 ZDHHC17Q8IUH5 632 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 SCN4BQ8IWT1 228 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 UNC45BQ8IWX7 931 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 IQCKQ8N0W5 287 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 KRT222Q8N1A0 295 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 THEM5Q8N1Q8 247 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 PQLC3Q8N755 202 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 PCDH19Q8TAB3 1148 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 SNIP1Q8TAD8 396 aaKnown RBP6.47□□□□□ -1.37
CHD9-217ENST00000565832 UHMK1Q8TAS1 419 aaKnown RBP6.47□□□□□ -1.37
CHD9-217ENST00000565832 SLC7A14Q8TBB6 771 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 CAVIN3Q969G5 261 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 SMARCD1Q96GM5 515 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 UROC1Q96N76 676 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 ZIM3Q96PE6 472 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 RAB17Q9H0T7 212 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 CSNK1G1Q9HCP0 422 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 ETNK2Q9NVF9 386 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 MTMR10Q9NXD2 777 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 KANSL3Q9P2N6 904 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 ASIC3Q9UHC3 531 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 TBX21Q9UL17 535 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 FAN1Q9Y2M0 1017 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 HEY1Q9Y5J3 304 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 SNX10Q9Y5X0 201 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 TSC2P49815 1807 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 NLRC5Q86WI3 1866 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 PTPRDP23468 1912 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 FAM187AA6NFU0 413 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 FAM72CH0Y354 149 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 J3QL48 77 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 C2CD2LO14523 706 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 CAPN9O14815 690 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 ATP8B1O43520 1251 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 HSF2BPO75031 334 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 OAZ2O95190 189 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 CXCL10P02778 98 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 GOT1P17174 413 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 OAS2P29728 719 aaKnown RBP6.47□□□□□ -1.37
CHD9-217ENST00000565832 CHKAP35790 457 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 HSD17B3P37058 310 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 GJA8P48165 433 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 ITGA8P53708 1063 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 SNX16P57768 344 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 DEFB103AP81534 67 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 GAD2Q05329 585 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 KRT81Q14533 505 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 TLR1Q15399 786 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 OASLQ15646 514 aaKnown RBP6.47□□□□□ -1.37
CHD9-217ENST00000565832 SKIDA1Q1XH10 827 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 SLC25A52Q3SY17 297 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 CTXN3Q4LDR2 81 aa6.47□□□□□ -1.37
CHD9-217ENST00000565832 BOLA3Q53S33 107 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms