RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 CYP3A7-CYP3A51PA0A087WV96 503 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 A0A1W2PQ72 361 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 A0A1W2PRG0 241 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 LRRC72A6NJI9 287 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CENPXA8MT69 81 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF487B1APH4 448 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 ATP6V1G2-DDX39BF2Z307 99 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 hCG_2039718K7EN88 272 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 PSMD9O00233 223 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 LAD1O00515 517 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 KCNK3O14649 394 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 KLF11O14901 512 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 RAD51BO15315 384 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 ARHGEF9O43307 516 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 DFNA5O60443 496 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 STAU1O95793 577 aaKnown RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 TGM6O95932 706 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 POLR3DP05423 398 aaPredicted RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 POLR2MP0CAP2 368 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 FDPSP14324 419 aaKnown RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CCNA2P20248 432 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CYP3A7P24462 503 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CD40LGP29965 261 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CXCR5P32302 372 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CIITAP33076 1130 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 EIF4A3P38919 411 aaKnown RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 ALDH1A3P47895 512 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 NPTX2P47972 431 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 HOXA1P49639 335 aaPredicted RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 SCNN1DP51172 638 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 COPAP53621 1224 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 RCAN1P53805 252 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 SLC12A2P55011 1212 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 PSMD4P55036 377 aaKnown RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 DCDC1P59894 354 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 ERVK-21P61565 698 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 TAP1Q03518 808 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 PTK2Q05397 1052 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 ITGADQ13349 1161 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 TFDP1Q14186 410 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 TAF5Q15542 800 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 DLG2Q15700 870 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 SLC18A3Q16572 532 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 GRAMD1BQ3KR37 738 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 RUNDC3AQ59EK9 446 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 STYK1Q6J9G0 422 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 UGT3A1Q6NUS8 523 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 TTI2Q6NXR4 508 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 LLGL2Q6P1M3 1020 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 TATDN1Q6P1N9 297 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 LETMD1Q6P1Q0 360 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 ARHGAP36Q6ZRI8 547 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 FAM47EQ6ZV65 393 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 BTN2A1Q7KYR7 527 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 NLRP10Q86W26 655 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 GATAD2AQ86YP4 633 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 LIX1LQ8IVB5 337 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 HERC6Q8IVU3 1022 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CHPFQ8IZ52 775 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 FAM9CQ8IZT9 166 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 SIX6OS1Q8N1H7 587 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 PQLC1Q8N2U9 271 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CCDC33Q8N5R6 958 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 PACRGLQ8N7B6 248 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CCNYL1Q8N7R7 359 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 FNDC5Q8NAU1 212 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF784Q8NCA9 323 aaPredicted RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CDC26Q8NHZ8 85 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 LRRC20Q8TCA0 184 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 DENND1AQ8TEH3 1009 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 GANCQ8TET4 914 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 FNIP1Q8TF40 1166 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 PSPC1Q8WXF1 523 aaKnown RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 NXPE3Q969Y0 559 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 VTI1AQ96AJ9 217 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 SH3KBP1Q96B97 665 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 CMTM5Q96DZ9 223 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 MTMR8Q96EF0 704 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 SLC10A4Q96EP9 437 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 DCUN1D1Q96GG9 259 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 TOE1Q96GM8 510 aaKnown RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 TMEM87BQ96K49 555 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 AK8Q96MA6 479 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF560Q96MR9 790 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 SERPINI1Q99574 410 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 USB1Q9BQ65 265 aaKnown RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 WACQ9BTA9 647 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 BTBD2Q9BX70 525 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 TEKT3Q9BXF9 490 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 MTFR1LQ9H019 292 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 NEUROG2Q9H2A3 272 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 PPA2Q9H2U2 334 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 ARMC7Q9H6L4 198 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 DHX33Q9H6R0 707 aaKnown RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 TMEM206Q9H813 350 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 VRTNQ9H8Y1 702 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 MLXIPQ9HAP2 919 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 PLEKHA5Q9HAU0 1116 aa6.47□□□□□ -1.37
PTPN9-204ENST00000564970 MRPL40Q9NQ50 206 aaKnown RBP6.47□□□□□ -1.37
PTPN9-204ENST00000564970 TIGARQ9NQ88 270 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms