RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 MAPRE1Q15691 268 aaKnown RBP16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 ITPRIPL2Q3MIP1 535 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 ZNF677Q86XU0 584 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 SPEM1Q8N4L4 309 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 ZNF516Q92618 1163 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 MYLPFQ96A32 169 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 RUNDC3BQ96NL0 473 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 KRT12Q99456 494 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 SH3GL2Q99962 352 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 GKN1Q9NS71 199 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 CALCOCO1Q9P1Z2 691 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 UVRAGQ9P2Y5 699 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 BUB1BO60566 1050 aaPredicted RBP16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 STAU1O95793 577 aaKnown RBP16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 PDGFRBP09619 1106 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 FAM163BP0C2L3 166 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 GBP1P32455 592 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 NRLP54845 237 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 BPIFB4P59827 614 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 SATB1Q01826 763 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 CCINQ13939 588 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 DGKKQ5KSL6 1271 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 SPDYCQ5MJ68 293 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 VSTM1Q6UX27 236 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 ARHGEF19Q8IW93 802 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 SCN4BQ8IWT1 228 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 UBL4BQ8N7F7 174 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 RIN3Q8TB24 985 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 MYCBPAPQ8TBZ2 947 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 EPS8L1Q8TE68 723 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 TRIM11Q96F44 468 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 SPATA17Q96L03 361 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 CEP295NLQ96MC4 621 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 MRPL45Q9BRJ2 306 aaKnown RBP16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 HPS4Q9NQG7 708 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 RAB20Q9NX57 234 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 NME7Q9Y5B8 376 aa16.87■□□□□ 0.29
LPCAT4-205ENST00000563748 KRIT1O00522 736 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 PAPSS2O95340 614 aaPredicted RBP16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 CXCL12P48061 93 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 PDE6CP51160 858 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 GUCY2DQ02846 1103 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 PON2Q15165 354 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 Q6ZS52 159 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 DCLK2Q8N568 766 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 PLEKHO2Q8TD55 490 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 LRRC45Q96CN5 670 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 HINFPQ9BQA5 517 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 XYLT2Q9H1B5 865 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 SNX25Q9H3E2 840 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 EPB41L5Q9HCM4 733 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 FAM114A2Q9NRY5 505 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 EHD2Q9NZN4 543 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 NOCTQ9UK39 431 aaKnown RBP16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 SMG5Q9UPR3 1016 aaKnown RBP16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 CACNA1AO00555 2505 aa16.86■□□□□ 0.29
LPCAT4-205ENST00000563748 CEP250Q9BV73 2442 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 FTLP02792 175 aaPredicted RBP16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 IVLP07476 585 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 GLI1P08151 1106 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 BDNFP23560 247 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 GNL1P36915 607 aaPredicted RBP16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 AP3M2P53677 418 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 SLC7A5Q01650 507 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 CDR2Q01850 454 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 RUNX3Q13761 415 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 WDR72Q3MJ13 1102 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 LEKR1Q6ZMV7 388 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 KIAA2013Q8IYS2 634 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 SYNPOQ8N3V7 929 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 SEC14L1Q92503 715 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 CHFRQ96EP1 664 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 PCED1BQ96HM7 432 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 SLC22A12Q96S37 553 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 FAM129AQ9BZQ8 928 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 RAB17Q9H0T7 212 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 EBF3Q9H4W6 596 aa16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 SEPT11Q9NVA2 429 aaKnown RBP16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 CWC15Q9P013 229 aaKnown RBP16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 PACSIN2Q9UNF0 486 aaPredicted RBP16.85■□□□□ 0.29
LPCAT4-205ENST00000563748 TRAV19A0A0A6YYK7 116 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 FAM187AA6NFU0 413 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 OTOL1A6NHN0 477 aaPredicted RBP16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 DDX3YO15523 660 aaKnown RBP16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 RAD51CO43502 376 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 CYP1A2P05177 515 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 USP17L7P0C7H9 530 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 MYBL1P10243 752 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 ARSAP15289 507 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 ATICP31939 592 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 GGCXP38435 758 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 HSPA9P38646 679 aaKnown RBP16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 ID4P47928 161 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 MYL6P60660 151 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 USP4Q13107 963 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 TRPC3Q13507 836 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 DHX34Q14147 1143 aaKnown RBP16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 PDGFRLQ15198 375 aa16.84■□□□□ 0.29
LPCAT4-205ENST00000563748 ZNF77Q15935 545 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms