RNA–Protein interactions for RNA: ENST00000563253.5

NAE1-211, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-211ENST00000563253 CD63P08962 238 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 TRIM27P14373 513 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 IDEP14735 1019 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 EGR1P18146 543 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 MATN1P21941 496 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 GABRB3P28472 473 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 IGHMBP2P38935 993 aaKnown RBP4.79□□□□□ -1.64
NAE1-211ENST00000563253 CPA2P48052 419 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 FOXG1P55316 489 aaPredicted RBP4.79□□□□□ -1.64
NAE1-211ENST00000563253 ATP1A4Q13733 1029 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 SLC5A9Q2M3M2 681 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 EARS2Q5JPH6 523 aaKnown RBP4.79□□□□□ -1.64
NAE1-211ENST00000563253 TLDC1Q6P9B6 456 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 CLASRPQ8N2M8 674 aaKnown RBP4.79□□□□□ -1.64
NAE1-211ENST00000563253 PIGKQ92643 395 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 AKAP1Q92667 903 aaKnown RBP eCLIP4.79□□□□□ -1.64
NAE1-211ENST00000563253 TRMT61AQ96FX7 289 aaKnown RBP4.79□□□□□ -1.64
NAE1-211ENST00000563253 ZFYVE19Q96K21 471 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 WACQ9BTA9 647 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 WDR26Q9H7D7 661 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 STARD7Q9NQZ5 370 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 ZMYND8Q9ULU4 1186 aaPredicted RBP4.79□□□□□ -1.64
NAE1-211ENST00000563253 MAN2B2Q9Y2E5 1009 aa4.79□□□□□ -1.64
NAE1-211ENST00000563253 TTC34A8MYJ7 566 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 TRIM38O00635 465 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 USP12O75317 370 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 NDST3O95803 873 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 SLC3A2P08195 630 aaKnown RBP4.78□□□□□ -1.64
NAE1-211ENST00000563253 MMP8P22894 467 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 RPS6KB1P23443 525 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 NDUFS1P28331 727 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 HOXA7P31268 230 aaPredicted RBP4.78□□□□□ -1.64
NAE1-211ENST00000563253 HOXD12P35452 270 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 IDUAP35475 653 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 VPS41P49754 854 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 SEMA3BQ13214 749 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 GAB1Q13480 694 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 FHL1Q13642 323 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 PMS2P11Q13670 270 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 ZNF793Q6ZN11 406 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 RBM44Q6ZP01 1051 aaKnown RBP4.78□□□□□ -1.64
NAE1-211ENST00000563253 ARFGAP1Q8N6T3 406 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 ZNF548Q8NEK5 533 aaPredicted RBP4.78□□□□□ -1.64
NAE1-211ENST00000563253 BCAS4Q8TDM0 211 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 OVCA2Q8WZ82 227 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 GRAMD1AQ96CP6 724 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 GDF15Q99988 308 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 TRMOQ9BU70 441 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 SCNM1Q9BWG6 230 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 GATA5Q9BWX5 397 aaPredicted RBP4.78□□□□□ -1.64
NAE1-211ENST00000563253 NAA15Q9BXJ9 866 aaKnown RBP4.78□□□□□ -1.64
NAE1-211ENST00000563253 EIF2AQ9BY44 585 aaKnown RBP4.78□□□□□ -1.64
NAE1-211ENST00000563253 ASNSD1Q9NWL6 643 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.78□□□□□ -1.64
NAE1-211ENST00000563253 HS3ST3B1Q9Y662 390 aa4.78□□□□□ -1.64
NAE1-211ENST00000563253 SLC22A23A1A5C7 686 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 KIF3BO15066 747 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 VIPP01282 170 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 PECAM1P16284 738 aaPredicted RBP4.77□□□□□ -1.65
NAE1-211ENST00000563253 ME1P48163 572 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 SLC12A2P55011 1212 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 LINC00205P59089 165 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 MTA1Q13330 715 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 MTX1Q13505 466 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 ARL13BQ3SXY8 428 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 ARHGAP15Q53QZ3 475 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 CCDC144NLQ6NUI1 221 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 HIBCHQ6NVY1 386 aaPredicted RBP4.77□□□□□ -1.65
NAE1-211ENST00000563253 BHLHA9Q7RTU4 235 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 CCAR1Q8IX12 1150 aaKnown RBP4.77□□□□□ -1.65
NAE1-211ENST00000563253 TXLNBQ8N3L3 684 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 OR52L2PQ8NGH6 319 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 MPLKIPQ8TAP9 179 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 SENP7Q9BQF6 1050 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 POT1Q9NUX5 634 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 TMEM45AQ9NWC5 275 aa4.77□□□□□ -1.65
NAE1-211ENST00000563253 TTBK1Q5TCY1 1321 aaPredicted RBP4.76□□□□□ -1.65
NAE1-211ENST00000563253 CCDC187A0A096LP49 1063 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 FAM234BA2RU67 622 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 INSIG1O15503 277 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 HARSP12081 509 aaKnown RBP4.76□□□□□ -1.65
NAE1-211ENST00000563253 ST6GAL1P15907 406 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 SCP2P22307 547 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 GSTM5P46439 218 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 NSUN2Q08J23 767 aaKnown RBP eCLIP4.76□□□□□ -1.65
NAE1-211ENST00000563253 ELF2Q15723 593 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 MAPKAPK3Q16644 382 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 LEXMQ3ZCV2 418 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 ACSM6Q6P461 480 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 KYAT3Q6YP21 454 aaKnown RBP4.76□□□□□ -1.65
NAE1-211ENST00000563253 PIK3AP1Q6ZUJ8 805 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 FAM57BQ71RH2 274 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 RFX6Q8HWS3 928 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 UEVLDQ8IX04 471 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 GLIS1Q8NBF1 620 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 PJA1Q8NG27 643 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 NSMCE1Q8WV22 266 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 CELF1Q92879 486 aaKnown RBP4.76□□□□□ -1.65
NAE1-211ENST00000563253 GJA10Q969M2 543 aa4.76□□□□□ -1.65
NAE1-211ENST00000563253 NUDT22Q9BRQ3 303 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms