RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 HERC2P3Q9BVR0 1158 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 WDCPQ9H6R7 721 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 GMIPQ9P107 970 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 SFMBT1Q9UHJ3 866 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 HPCAL4Q9UM19 191 aa18.73■□□□□ 0.59
COMMD4-208ENST00000563220 FAM72CH0Y354 149 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 RBP3P10745 1247 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 TGM2P21980 687 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 YWHAQP27348 245 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 GDF10P55107 478 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 SCAPQ12770 1279 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 EFHC2Q5JST6 749 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 FAM72AQ5TYM5 149 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 FAM72DQ6L9T8 149 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 DDX53Q86TM3 631 aaKnown RBP18.72■□□□□ 0.59
COMMD4-208ENST00000563220 FAM72BQ86X60 149 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 GIPC2Q8TF65 315 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 CASP10Q92851 521 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 ETNK2Q9NVF9 386 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 PATJQ8NI35 1801 aa18.72■□□□□ 0.59
COMMD4-208ENST00000563220 LINC00271P0C7V0 271 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 ADCY8P40145 1251 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 ARL4AP40617 200 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 GLUD2P49448 558 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 AIF1P55008 147 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 HTRA4P83105 476 aaPredicted RBP18.71■□□□□ 0.59
COMMD4-208ENST00000563220 ZC3H18Q86VM9 953 aaKnown RBP18.71■□□□□ 0.59
COMMD4-208ENST00000563220 UNC45BQ8IWX7 931 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 CCDC89Q8N998 374 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 RNF139Q8WU17 664 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 FMO2Q99518 471 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 TKTL2Q9H0I9 626 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 VIPAS39Q9H9C1 493 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 WHRNQ9P202 907 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 RCOR3Q9P2K3 495 aaPredicted RBP18.71■□□□□ 0.59
COMMD4-208ENST00000563220 MFHAS1Q9Y4C4 1052 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 HEY1Q9Y5J3 304 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 SGK1O00141 431 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 MCF2LO15068 1137 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 IRAK2O43187 625 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 CREB3O43889 395 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 MAP3K6O95382 1288 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 ATF2P15336 505 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 ATF6P18850 670 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 ITIH2P19823 946 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 GBP1P32455 592 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 HSPA9P38646 679 aaKnown RBP18.71■□□□□ 0.59
COMMD4-208ENST00000563220 RPL10AP62906 217 aaKnown RBP18.71■□□□□ 0.59
COMMD4-208ENST00000563220 SLC10A2Q12908 348 aaPredicted RBP18.71■□□□□ 0.59
COMMD4-208ENST00000563220 TAF10Q12962 218 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 C7orf61Q8IZ16 206 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 MREGQ8N565 214 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 FBXO32Q969P5 355 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 SNF8Q96H20 258 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 SMOC2Q9H3U7 446 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 SNX10Q9Y5X0 201 aa18.71■□□□□ 0.59
COMMD4-208ENST00000563220 ABLIM3O94929 683 aa18.7■□□□□ 0.58
COMMD4-208ENST00000563220 RTN3O95197 1032 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-208ENST00000563220 SEC24AO95486 1093 aa18.7■□□□□ 0.58
COMMD4-208ENST00000563220 IFNB1P01574 187 aa18.7■□□□□ 0.58
COMMD4-208ENST00000563220 GBE1Q04446 702 aa18.7■□□□□ 0.58
COMMD4-208ENST00000563220 SEMA3BQ13214 749 aa18.7■□□□□ 0.58
COMMD4-208ENST00000563220 ARL13BQ3SXY8 428 aa18.7■□□□□ 0.58
COMMD4-208ENST00000563220 RASIP1Q5U651 963 aa18.7■□□□□ 0.58
COMMD4-208ENST00000563220 NCBP2-AS2Q69YL0 99 aa18.7■□□□□ 0.58
COMMD4-208ENST00000563220 VPS52Q8N1B4 723 aa18.7■□□□□ 0.58
COMMD4-208ENST00000563220 ZNF461Q8TAF7 563 aa18.7■□□□□ 0.58
COMMD4-208ENST00000563220 AUTS2Q8WXX7 1259 aa18.7■□□□□ 0.58
COMMD4-208ENST00000563220 ARHGEF4Q9NR80 690 aa18.7■□□□□ 0.58
COMMD4-208ENST00000563220 AFF4Q9UHB7 1163 aaKnown RBP18.7■□□□□ 0.58
COMMD4-208ENST00000563220 MSI1O43347 362 aaKnown RBP18.69■□□□□ 0.58
COMMD4-208ENST00000563220 ZFXP17010 805 aaPredicted RBP18.69■□□□□ 0.58
COMMD4-208ENST00000563220 SYN1P17600 705 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 ITGA8P53708 1063 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 CALCOCO2Q13137 446 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 RHBDF2Q6PJF5 856 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 LRRN4Q8WUT4 740 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 RNF34Q969K3 372 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 TXLNGYQ9BZA5 131 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 SLC38A8A6NNN8 435 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 H3BRJ5 948 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 H7C0C1 242 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 ATP5OP48047 213 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 TUFMP49411 452 aaKnown RBP18.69■□□□□ 0.58
COMMD4-208ENST00000563220 NRLP54845 237 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 DPYSQ14117 519 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 DARS2Q6PI48 645 aaKnown RBP18.69■□□□□ 0.58
COMMD4-208ENST00000563220 RFX8Q6ZV50 586 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 TMC3Q7Z5M5 1100 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 ARHGAP18Q8N392 663 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 FIBCD1Q8N539 461 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 FAM71DQ8N9W8 422 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 RSAD2Q8WXG1 361 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 ADAM7Q9H2U9 754 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 PCDH9Q9HC56 1237 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 COMMD8Q9NX08 183 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 ARHGEF38Q9NXL2 777 aa18.69■□□□□ 0.58
COMMD4-208ENST00000563220 CARNS1A5YM72 827 aa18.68■□□□□ 0.58
COMMD4-208ENST00000563220 EEF2KO00418 725 aaKnown RBP18.68■□□□□ 0.58
COMMD4-208ENST00000563220 TBX18O95935 607 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms