RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 RALGPS2Q86X27 583 aaPredicted RBP6.47□□□□□ -1.37
CNOT1-204ENST00000563130 ZDHHC17Q8IUH5 632 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 CSGALNACT1Q8TDX6 532 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 EDEM1Q92611 657 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 ATP2A3Q93084 1043 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 PCDHB18PQ96TA0 734 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 NUP58Q9BVL2 599 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 OSBPL6Q9BZF3 934 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 XPO4Q9C0E2 1151 aaKnown RBP6.47□□□□□ -1.37
CNOT1-204ENST00000563130 NACA2Q9H009 215 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 C8orf33Q9H7E9 229 aaPredicted RBP6.47□□□□□ -1.37
CNOT1-204ENST00000563130 ECT2Q9H8V3 914 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 TBC1D17Q9HA65 648 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 ASNSD1Q9NWL6 643 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 MARCH2Q9P0N8 246 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 DLGAP2Q9P1A6 1054 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 TBC1D14Q9P2M4 693 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 CEP83Q9Y592 693 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 TICRRQ7Z2Z1 1910 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 ITIH6Q6UXX5 1313 aa6.47□□□□□ -1.37
CNOT1-204ENST00000563130 SPECC1L-ADORA2AF8WAN1 911 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 MAN2B1O00754 1011 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 SLC9A3R1O14745 358 aaPredicted RBP6.46□□□□□ -1.37
CNOT1-204ENST00000563130 PI15O43692 258 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 IGLV3-25P01717 112 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 IGLV3-27P01718 113 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 CD72P21854 359 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 MMP8P22894 467 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 AVPR2P30518 371 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 GJA4P35212 333 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 SCNN1AP37088 669 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 PRKCIP41743 596 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 SOX9P48436 509 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 IFNAR2P48551 515 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 YWHAZP63104 245 aaKnown RBP6.46□□□□□ -1.37
CNOT1-204ENST00000563130 CENPCQ03188 943 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 AGERQ15109 404 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 TAF5Q15542 800 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 TRIP4Q15650 581 aaPredicted RBP6.46□□□□□ -1.37
CNOT1-204ENST00000563130 RHBDF2Q6PJF5 856 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 ZNF852Q6ZMS4 543 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 RSRC2Q7L4I2 434 aaKnown RBP6.46□□□□□ -1.37
CNOT1-204ENST00000563130 SLC26A9Q7LBE3 791 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 GAS2L3Q86XJ1 694 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 MIB1Q86YT6 1006 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 FMNL3Q8IVF7 1028 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 BBS7Q8IWZ6 715 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 TMEM105Q8N8V8 129 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 ZNF397Q8NF99 534 aaPredicted RBP6.46□□□□□ -1.37
CNOT1-204ENST00000563130 PJA1Q8NG27 643 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 SNIP1Q8TAD8 396 aaKnown RBP6.46□□□□□ -1.37
CNOT1-204ENST00000563130 IQCDQ96DY2 449 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 SLC2A13Q96QE2 648 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 NELL2Q99435 816 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 POPDC2Q9HBU9 364 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 LTB4R2Q9NPC1 389 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 SFMBT1Q9UHJ3 866 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 SH3BP1Q9Y3L3 701 aa6.46□□□□□ -1.37
CNOT1-204ENST00000563130 HBS1LQ9Y450 684 aaKnown RBP6.46□□□□□ -1.37
CNOT1-204ENST00000563130 MTF2Q9Y483 593 aaPredicted RBP6.46□□□□□ -1.37
CNOT1-204ENST00000563130 ZNF318Q5VUA4 2279 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 TTC24A2A3L6 582 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-204ENST00000563130 TRDMT1O14717 391 aaKnown RBP6.46□□□□□ -1.38
CNOT1-204ENST00000563130 SCAMP3O14828 347 aaKnown RBP6.46□□□□□ -1.38
CNOT1-204ENST00000563130 NFATC1O95644 943 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 GYPCP04921 128 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 CYP17A1P05093 508 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 CCDC172P0C7W6 258 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 TARSP26639 723 aaKnown RBP6.46□□□□□ -1.38
CNOT1-204ENST00000563130 VCPP55072 806 aaKnown RBP6.46□□□□□ -1.38
CNOT1-204ENST00000563130 SNX16P57768 344 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 SLC6A3Q01959 620 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 ARID5AQ03989 594 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 GOLGA8FQ08AF8 430 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 GOLGA8DPQ0D2H9 430 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 PTP4A2Q12974 167 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 NNTQ13423 1086 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 DHCR24Q15392 516 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 EFHC1Q5JVL4 640 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 SYPL2Q5VXT5 272 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 SARM1Q6SZW1 724 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 TRIM72Q6ZMU5 477 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 FAM183BPQ6ZVS7 135 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 XYLT1Q86Y38 959 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 FAM217AQ8IXS0 508 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 CCDC105Q8IYK2 499 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 CPA6Q8N4T0 437 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 FLCNQ8NFG4 579 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 FAM174AQ8TBP5 190 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 DQX1Q8TE96 717 aaKnown RBP6.46□□□□□ -1.38
CNOT1-204ENST00000563130 IPO4Q8TEX9 1081 aaKnown RBP6.46□□□□□ -1.38
CNOT1-204ENST00000563130 RNF139Q8WU17 664 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 CPA5Q8WXQ8 436 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 FAM3CQ92520 227 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 SYN2Q92777 582 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-204ENST00000563130 FOXJ1Q92949 421 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 CLDN23Q96B33 292 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 FAM149B1Q96BN6 582 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 PLD4Q96BZ4 506 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 C18orf8Q96DM3 657 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms