RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.79□□□□□ -1.16
TCF4-216ENST00000562680 MYLPFQ96A32 169 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 CHORDC1Q9UHD1 332 aaPredicted RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 FGF19O95750 216 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 SPRP35270 261 aaPredicted RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 IFNAR2P48551 515 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 CARSP49589 748 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 AMPD2Q01433 879 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 C2CD6Q53TS8 623 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 CTU1Q7Z7A3 348 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 RASSF3Q86WH2 238 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 MIB1Q86YT6 1006 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 RBM12BQ8IXT5 1001 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 FAM71DQ8N9W8 422 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 RAPGEF5Q92565 580 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 CAVIN3Q969G5 261 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 STAMBPL1Q96FJ0 436 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 HES6Q96HZ4 224 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 PCYT2Q99447 389 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 HNRNPABQ99729 332 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 C16orf70Q9BSU1 422 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 TTPALQ9BTX7 342 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 PALMDQ9NP74 551 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 SPG21Q9NZD8 308 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 RAB21Q9UL25 225 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 SBF2Q86WG5 1849 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 LSM1O15116 133 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 CHEK2O96017 543 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 FOSL1P15407 271 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 AVPR1AP37288 418 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 MATKP42679 507 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 HDAC4P56524 1084 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 SESN2P58004 480 aaPredicted RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 ZNF200P98182 395 aaPredicted RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 TRIM68Q6AZZ1 485 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 RETSATQ6NUM9 610 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 NUP93Q8N1F7 819 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 OR6P1Q8NGX9 317 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 GDAP1Q8TB36 358 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 STMN2Q93045 179 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 SERPINB12Q96P63 405 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 CINPQ9BW66 212 aaPredicted RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 SCOCQ9UIL1 159 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 CTCFP49711 727 aaPredicted RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 GSCP56915 257 aaPredicted RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 PSMD5Q16401 504 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 BBS12Q6ZW61 710 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 MON1AQ86VX9 555 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 GFM2Q969S9 779 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 FUBP3Q96I24 572 aaKnown RBP eCLIP7.79□□□□□ -1.16
TCF4-216ENST00000562680 RAB3IPQ96QF0 476 aaPredicted RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 TBC1D13Q9NVG8 400 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 TMEM191CA6NGB0 347 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 SLC9A3R1O14745 358 aaPredicted RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 AOC2O75106 756 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 TRUB2O95900 331 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 CCL23P55773 120 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 STX1BP61266 288 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 MAGOHP61326 146 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 MRPS5P82675 430 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 PTK6Q13882 451 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 MFSD7Q6UXD7 560 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 SLC26A9Q7LBE3 791 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 CREG2Q8IUH2 290 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 SCUBE3Q8IX30 993 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 GSPT2Q8IYD1 628 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 MYCBPAPQ8TBZ2 947 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 PDCD6IPQ8WUM4 868 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 LPPQ93052 612 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 SIX2Q9NPC8 291 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 NOP53Q9NZM5 478 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 CNTN3Q9P232 1028 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 TUBGCP4Q9UGJ1 667 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 BNIP3LO60238 219 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 CYP1A1P04798 512 aaPredicted RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 RHOCP08134 193 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 PFKMP08237 780 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 KDELR1P24390 212 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 KLRC2P26717 231 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 TYK2P29597 1187 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 DRG2P55039 364 aaKnown RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 POLD3Q15054 466 aaPredicted RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 ACCSLQ4AC99 568 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 PREPLQ4J6C6 727 aaPredicted RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 KCNT1Q5JUK3 1230 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 FAM183BPQ6ZVS7 135 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 CRLF3Q8IUI8 442 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 ZSWIM2Q8NEG5 633 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 LRRC39Q96DD0 335 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 TSSK1BQ9BXA7 367 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 KLC4Q9NSK0 619 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 ADGRA3Q8IWK6 1321 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 A0A0U1RQF3 1178 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 MAGEB16A2A368 324 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 SLC4A1P02730 911 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 PYGMP11217 842 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 H2AFXP16104 143 aaPredicted RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 GJA5P36382 358 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 INTS6LQ5JSJ4 861 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms