RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 TULP2O00295 520 aa17.5■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ARHGAP33O14559 1287 aa17.5■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 TKTL1P51854 596 aa17.5■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 KIAA1324Q6UXG2 1013 aaKnown RBP17.5■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 RABEPKQ7Z6M1 372 aa17.5■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ARHGAP18Q8N392 663 aa17.5■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ANKRD52Q8NB46 1076 aa17.5■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 NDRG1Q92597 394 aaKnown RBP17.5■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 GATA6Q92908 595 aa17.5■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 PIWIL1Q96J94 861 aaKnown RBP17.5■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 DCLK3Q9C098 648 aa17.5■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 GDPD2Q9HCC8 539 aa17.5■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 SLC12A8A0AV02 714 aa17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 CETN3O15182 167 aa17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 NDUFS2O75306 463 aa17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 EPB41P11171 864 aaKnown RBP17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 PNOCQ13519 176 aa17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 PM20D1Q6GTS8 502 aa17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 RSRC2Q7L4I2 434 aaKnown RBP17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 METTL3Q86U44 580 aaKnown RBP17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 FAM217AQ8IXS0 508 aa17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 CPXM2Q8N436 756 aa17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 HDDC3Q8N4P3 179 aa17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 KDF1Q8NAX2 398 aaPredicted RBP17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 RBBP8NLQ8NC74 664 aaPredicted RBP17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 FAM124BQ9H5Z6 455 aaPredicted RBP17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 PRDM16Q9HAZ2 1276 aa17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 USP36Q9P275 1121 aaKnown RBP17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 RALYQ9UKM9 306 aaKnown RBP17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ZMIZ1Q9ULJ6 1067 aa17.49■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 KCNJ18B7U540 433 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 NPC1O15118 1278 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 HYAL3O43820 417 aaPredicted RBP17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 STX10O60499 249 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 OPHN1O60890 802 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ZBED1O96006 694 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 CD59P13987 128 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 MAOBP27338 520 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 CD6P30203 668 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 PRCPP42785 496 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 FAM193AP78312 1265 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 SIM1P81133 766 aaPredicted RBP17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 PDE4CQ08493 712 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ZNF234Q14588 700 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 STARD3Q14849 445 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 GOLGA7BQ2TAP0 167 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 PLEKHG6Q3KR16 790 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 DCAF17Q5H9S7 520 aaPredicted RBP17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 TMEM215Q68D42 235 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ANKS1BQ7Z6G8 1248 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 RGL4Q8IZJ4 473 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 SORCS1Q8WY21 1168 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 TOE1Q96GM8 510 aaKnown RBP17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ULBP1Q9BZM6 244 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 DNAAF2Q9NVR5 837 aaKnown RBP17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 WSB2Q9NYS7 404 aaPredicted RBP17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 TSPAN16Q9UKR8 245 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 STRIP2Q9ULQ0 834 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 COQ4Q9Y3A0 265 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 NBEAQ8NFP9 2946 aa17.48■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 GON4LQ3T8J9 2241 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 XPO1O14980 1071 aaKnown RBP17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 GJB3O75712 270 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 CYBBP04839 570 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 SYPP08247 313 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 PRKCHP24723 683 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ZNF132P52740 706 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 COPAP53621 1224 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 PMS1P54277 932 aaKnown RBP17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 SLC8A3P57103 927 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 CUL2Q13617 745 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 TRIP4Q15650 581 aaPredicted RBP17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 TCERG1LQ5VWI1 586 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ZC3H3Q8IXZ2 948 aaKnown RBP17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 DDI1Q8WTU0 396 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 FOXJ1Q92949 421 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 PLD4Q96BZ4 506 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ITM2CQ9NQX7 267 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ELOVL2Q9NXB9 296 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 KLK13Q9UKR3 277 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ATP6V1DQ9Y5K8 247 aa17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 MUC22E2RYF6 1773 aaPredicted RBP17.47■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 SLC16A3O15427 465 aaKnown RBP17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 HOXD9P28356 352 aaPredicted RBP17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 TPMTP51580 245 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 BCAT1P54687 386 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 ADIGQ0VDE8 80 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 EIF4HQ15056 248 aaKnown RBP17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 SYCP2LQ5T4T6 812 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 TMPRSS6Q8IU80 811 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 FMNL3Q8IVF7 1028 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 FMR1NBQ8N0W7 255 aaPredicted RBP17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 UBR7Q8N806 425 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 UCMAQ8WVF2 138 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 CAMK1GQ96NX5 476 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 GPR174Q9BXC1 333 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 CIPCQ9C0C6 399 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 SUSD2Q9UGT4 822 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 NEUROG3Q9Y4Z2 214 aa17.46■□□□□ 0.39
VPS9D1-AS1-201ENST00000562298 CKAP5Q14008 2032 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms