RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 CLEC9AQ6UXN8 241 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 RBM44Q6ZP01 1051 aaKnown RBP3.9□□□□□ -1.79
USP8-216ENST00000561206 PIGKQ92643 395 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 TAF15Q92804 592 aaKnown RBP eCLIP3.9□□□□□ -1.79
USP8-216ENST00000561206 RUNDC1Q96C34 613 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 ARHGAP39Q9C0H5 1083 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 CDH19Q9H159 772 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 DECR2Q9NUI1 292 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 COL15A1P39059 1388 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 A0A0G2JK05 382 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 SPTLC2O15270 562 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 RFPL1O75677 317 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 INMTO95050 263 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 TMIGD3P0DMS9 266 aaPredicted RBP3.89□□□□□ -1.79
USP8-216ENST00000561206 TMEM225BP0DP42 221 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 RAB27AP51159 221 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 RAE1P78406 368 aaKnown RBP3.89□□□□□ -1.79
USP8-216ENST00000561206 RPL36AP83881 106 aaKnown RBP3.89□□□□□ -1.79
USP8-216ENST00000561206 CNN3Q15417 329 aaKnown RBP3.89□□□□□ -1.79
USP8-216ENST00000561206 CNGA2Q16280 664 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 OTUD3Q5T2D3 398 aaPredicted RBP3.89□□□□□ -1.79
USP8-216ENST00000561206 GRHL2Q6ISB3 625 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 B4GALNT4Q76KP1 1039 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 RBM23Q86U06 439 aaKnown RBP3.89□□□□□ -1.79
USP8-216ENST00000561206 YAF2Q8IY57 180 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 SLC44A5Q8NCS7 719 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 ASB5Q8WWX0 329 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 GPATCH3Q96I76 525 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 TUBB6Q9BUF5 446 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 SELENOOQ9BVL4 669 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 CD93Q9NPY3 652 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 PAPOLBQ9NRJ5 636 aaKnown RBP3.89□□□□□ -1.79
USP8-216ENST00000561206 COL20A1Q9P218 1284 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 L1RE1Q9UN81 338 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 COG5Q9UP83 839 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 DOCK7Q96N67 2140 aa3.89□□□□□ -1.79
USP8-216ENST00000561206 TRBV5-3A0A0A0MS03 114 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 TMEM272A0A1B0GTI8 110 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 CFAP69A5D8W1 941 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 CAMTA2O94983 1202 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 HOXB2P14652 356 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 ST6GAL1P15907 406 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 TBXAS1P24557 533 aaPredicted RBP3.88□□□□□ -1.79
USP8-216ENST00000561206 GAS1P54826 345 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 KCNAB1Q14722 419 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 MANEALQ5VSG8 457 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 PLAG1Q6DJT9 500 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 P3H2Q8IVL5 708 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 SPEM1Q8N4L4 309 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 MBD3L2Q8NHZ7 208 aaPredicted RBP3.88□□□□□ -1.79
USP8-216ENST00000561206 MSI2Q96DH6 328 aaKnown RBP3.88□□□□□ -1.79
USP8-216ENST00000561206 PRR11Q96HE9 360 aaPredicted RBP3.88□□□□□ -1.79
USP8-216ENST00000561206 GATA5Q9BWX5 397 aaPredicted RBP3.88□□□□□ -1.79
USP8-216ENST00000561206 RNF26Q9BY78 433 aaPredicted RBP3.88□□□□□ -1.79
USP8-216ENST00000561206 CHST8Q9H2A9 424 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 SAP30LQ9HAJ7 183 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 AGO2Q9UKV8 859 aaKnown RBP3.88□□□□□ -1.79
USP8-216ENST00000561206 TPCN1Q9ULQ1 816 aa3.88□□□□□ -1.79
USP8-216ENST00000561206 NOP58Q9Y2X3 529 aaKnown RBP3.88□□□□□ -1.79
USP8-216ENST00000561206 CTNND1O60716 968 aaKnown RBP3.87□□□□□ -1.79
USP8-216ENST00000561206 WDR47O94967 919 aa3.87□□□□□ -1.79
USP8-216ENST00000561206 TFEBP19484 476 aa3.87□□□□□ -1.79
USP8-216ENST00000561206 CDC25AP30304 524 aa3.87□□□□□ -1.79
USP8-216ENST00000561206 ARRB2P32121 409 aa3.87□□□□□ -1.79
USP8-216ENST00000561206 IDUAP35475 653 aa3.87□□□□□ -1.79
USP8-216ENST00000561206 PPATQ06203 517 aa3.87□□□□□ -1.79
USP8-216ENST00000561206 MTAPQ13126 283 aa3.87□□□□□ -1.79
USP8-216ENST00000561206 MTA1Q13330 715 aa3.87□□□□□ -1.79
USP8-216ENST00000561206 ODF3L2Q3SX64 289 aa3.87□□□□□ -1.79
USP8-216ENST00000561206 SPATA2LQ8IUW3 424 aaPredicted RBP3.87□□□□□ -1.79
USP8-216ENST00000561206 MOV10Q9HCE1 1003 aaKnown RBP3.87□□□□□ -1.79
USP8-216ENST00000561206 DDX56Q9NY93 547 aaKnown RBP3.87□□□□□ -1.79
USP8-216ENST00000561206 CAPN11Q9UMQ6 739 aa3.87□□□□□ -1.79
USP8-216ENST00000561206 HPSEQ9Y251 543 aa3.87□□□□□ -1.79
USP8-216ENST00000561206 ATG13O75143 517 aa3.86□□□□□ -1.79
USP8-216ENST00000561206 ZKSCAN1P17029 563 aaPredicted RBP3.86□□□□□ -1.79
USP8-216ENST00000561206 BTF3P20290 206 aaKnown RBP3.86□□□□□ -1.79
USP8-216ENST00000561206 POLD2P49005 469 aa3.86□□□□□ -1.79
USP8-216ENST00000561206 CARSP49589 748 aaKnown RBP3.86□□□□□ -1.79
USP8-216ENST00000561206 P2RX3P56373 397 aa3.86□□□□□ -1.79
USP8-216ENST00000561206 FMO1Q01740 532 aa3.86□□□□□ -1.79
USP8-216ENST00000561206 NFATC4Q14934 902 aa3.86□□□□□ -1.79
USP8-216ENST00000561206 AASDHQ4L235 1098 aaPredicted RBP3.86□□□□□ -1.79
USP8-216ENST00000561206 FSTL5Q8N475 847 aaPredicted RBP3.86□□□□□ -1.79
USP8-216ENST00000561206 TMEM199Q8N511 208 aa3.86□□□□□ -1.79
USP8-216ENST00000561206 IQCF1Q8N6M8 205 aa3.86□□□□□ -1.79
USP8-216ENST00000561206 NUDCD2Q8WVJ2 157 aa3.86□□□□□ -1.79
USP8-216ENST00000561206 STAG1Q8WVM7 1258 aa3.86□□□□□ -1.79
USP8-216ENST00000561206 FAM227BQ96M60 508 aa3.86□□□□□ -1.79
USP8-216ENST00000561206 ABHD10Q9NUJ1 306 aa3.86□□□□□ -1.79
USP8-216ENST00000561206 A0A1W2PPC1 479 aa3.85□□□□□ -1.79
USP8-216ENST00000561206 PRPF3O43395 683 aaKnown RBP3.85□□□□□ -1.79
USP8-216ENST00000561206 ZC3H11AO75152 810 aaKnown RBP eCLIP3.85□□□□□ -1.79
USP8-216ENST00000561206 RHCEP18577 417 aa3.85□□□□□ -1.79
USP8-216ENST00000561206 IBSPP21815 317 aaPredicted RBP3.85□□□□□ -1.79
USP8-216ENST00000561206 SOX2P48431 317 aa3.85□□□□□ -1.79
USP8-216ENST00000561206 PTGR1Q14914 329 aa3.85□□□□□ -1.79
USP8-216ENST00000561206 ACOX1Q15067 660 aa3.85□□□□□ -1.79
USP8-216ENST00000561206 CNGA3Q16281 694 aa3.85□□□□□ -1.79
USP8-216ENST00000561206 CXorf57Q6NSI4 855 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms