RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 NRG1Q02297 640 aaPredicted RBP12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 CAV1Q03135 178 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 IFRD2Q12894 506 aaPredicted RBP12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 XRCC4Q13426 336 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 EIF4EBP2Q13542 120 aaPredicted RBP12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 HLTFQ14527 1009 aaKnown RBP eCLIP12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 NOMO1Q15155 1222 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 SNX30Q5VWJ9 437 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 DUPD1Q68J44 220 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 PDE12Q6L8Q7 609 aaKnown RBP12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 KLHDC10Q6PID8 442 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 CCDC149Q6ZUS6 474 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 TMCO2Q7Z6W1 182 aaPredicted RBP12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 SCD5Q86SK9 330 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 CCDC185Q8N715 623 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 STKLD1Q8NE28 680 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 SLC35B2Q8TB61 432 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 AENQ8WTP8 325 aaKnown RBP12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 C1orf54Q8WWF1 131 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 EDEM1Q92611 657 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 RNF34Q969K3 372 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 ACSF2Q96CM8 615 aaPredicted RBP12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 MYRFLQ96LU7 910 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 FERMT1Q9BQL6 677 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 HERPUD2Q9BSE4 406 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 FUT8Q9BYC5 575 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 OSBPL2Q9H1P3 480 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 SLC12A6Q9UHW9 1150 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 TLR6Q9Y2C9 796 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 YIPF1Q9Y548 306 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 ALPK3Q96L96 1907 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 CLUHO75153 1309 aa12.28□□□□□ -0.44
AC087878.1-201ENST00000560709 PLXNA3P51805 1871 aa12.27□□□□□ -0.44
AC087878.1-201ENST00000560709 HACD1B0YJ81 288 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 SMAPO00193 183 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 PRRG1O14668 218 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 MAP2K7O14733 419 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 APOEP02649 317 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 CD48P09326 243 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 ATF6P18850 670 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 CTNNB1P35222 781 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 GPR15P49685 360 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 RABGGTBP53611 331 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 EPHB3P54753 998 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 OTUD4Q01804 1114 aaKnown RBP12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 RING1Q06587 406 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 TAF10Q12962 218 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 CALCOCO2Q13137 446 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 CASP8Q14790 479 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 OASLQ15646 514 aaKnown RBP12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 TAF12Q16514 161 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 ZC3H12AQ5D1E8 599 aaKnown RBP12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 PPP6R3Q5H9R7 873 aaPredicted RBP12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 ALS2CLQ60I27 953 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 TTC27Q6P3X3 843 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 C4orf22Q6V702 233 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 GSTA5Q7RTV2 222 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 ANKS1BQ7Z6G8 1248 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 TTC9BQ8N6N2 239 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 GOLGA6L1Q8N7Z2 621 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 KLHL23Q8NBE8 558 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 ACTL9Q8TC94 416 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 DPF3Q92784 378 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 CSPG4P5Q96PW8 444 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 KCTD15Q96SI1 283 aaPredicted RBP12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 ADAM33Q9BZ11 813 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 CYP4F11Q9HBI6 524 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 MTMR10Q9NXD2 777 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 GMIPQ9P107 970 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 WHRNQ9P202 907 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 MTRF1LQ9UGC7 380 aaKnown RBP12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 ZMYND8Q9ULU4 1186 aaPredicted RBP12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 ZNF148Q9UQR1 794 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 R3HDM2Q9Y2K5 976 aaKnown RBP12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 SLC27A5Q9Y2P5 690 aa12.27□□□□□ -0.45
AC087878.1-201ENST00000560709 DNAH12Q6ZR08 3092 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 SYNJ2BP-COX16A0A087WUM0 186 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 EEF2KO00418 725 aaKnown RBP12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 NCAM2O15394 837 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 TEX28O15482 410 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 ADAM12O43184 909 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 ZMYND10O75800 440 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 RARGP13631 454 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 SYN1P17600 705 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 RPL17P18621 184 aaKnown RBP12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 ITIH2P19823 946 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 IL4RP24394 825 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 SERPINB6P35237 376 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 CARSP49589 748 aaKnown RBP12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 ATXN1P54253 815 aaKnown RBP12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 TPI1P60174 286 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 DYNLT1P63172 113 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 PITX1P78337 314 aaPredicted RBP12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 SEMA3BQ13214 749 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 MTMR3Q13615 1198 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 TRIP4Q15650 581 aaPredicted RBP12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 CA9Q16790 459 aa12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 PABPC1LQ4VXU2 614 aaKnown RBP12.26□□□□□ -0.45
AC087878.1-201ENST00000560709 RAB6CQ53S08 254 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms