RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 MIB1Q86YT6 1006 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 SPRTNQ9H040 489 aaPredicted RBP13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 KLHL31Q9H511 634 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 GGA3Q9NZ52 723 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 AKAP3O75969 853 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZBTB7AO95365 584 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 CYP1A1P04798 512 aaPredicted RBP13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 FYNP06241 537 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 HSMCR30P0CW71 290 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 HPGDP15428 266 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 MSH3P20585 1137 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 HALP42357 657 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZNF268Q14587 947 aaPredicted RBP13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 TRIQKQ629K1 86 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 TYW3Q6IPR3 259 aaKnown RBP13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 SV2AQ7L0J3 742 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZDHHC17Q8IUH5 632 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 ANKRD13AQ8IZ07 590 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 APOPT1Q96IL0 206 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 STK39Q9UEW8 545 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 TRHDEQ9UKU6 1024 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 MYRFQ9Y2G1 1151 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 A0A087WXM4 84 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 PIPSLA2A3N6 862 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 TTKP33981 857 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 SLC1A6P48664 564 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 CCNG1P51959 295 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 NME5P56597 212 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 PKN1Q16512 942 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 Q4G0T1 1027 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 SAMD4BQ5PRF9 694 aaKnown RBP13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 IRGCQ6NXR0 463 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 ADGRF2Q8IZF7 708 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 MIEF2Q96C03 454 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 C9orf16Q9BUW7 83 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 DCLK3Q9C098 648 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 PADI4Q9UM07 663 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 PCDHA3Q9Y5H8 950 aa13.54□□□□□ -0.24
CSPG4P11-201ENST00000560634 KCNQ2O43526 872 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 PEX1O43933 1283 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 MAP3K6O95382 1288 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 NTSR2O95665 410 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 SERPINF2P08697 491 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 RHOAP61586 193 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 NDUFA5Q16718 116 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 N4BP2L1Q5TBK1 243 aaPredicted RBP13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 ANGEL2Q5VTE6 544 aaKnown RBP13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 ANKS6Q68DC2 871 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 NECAB2Q7Z6G3 386 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 KRT73Q86Y46 540 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 FAM192AQ9GZU8 254 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 NMRAL1Q9HBL8 299 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 MIEF1Q9NQG6 463 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 SLC25A13Q9UJS0 675 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 ANKRD6Q9Y2G4 727 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 FAM25AB3EWG3 89 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 FAM25CB3EWG5 89 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 FAM25GB3EWG6 89 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 ANXA6P08133 673 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 MARC1Q5VT66 337 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 LZTR1Q8N653 840 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 AGBL3Q8NEM8 1001 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 OXNAD1Q96HP4 312 aaPredicted RBP13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 SLC25A23Q9BV35 468 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 RBM22Q9NW64 420 aaKnown RBP eCLIP13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 GPATCH2LQ9NWQ4 482 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 BTBD7Q9P203 1132 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 H3BQF6 201 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 RHOCP08134 193 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 NR2C2P49116 596 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 RENBPP51606 427 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 MSLNQ13421 630 aaPredicted RBP13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 ANKZF1Q9H8Y5 726 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 ARHGEF3Q9NR81 526 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 DUSP12Q9UNI6 340 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 ASNA1O43681 348 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 FAM20BO75063 409 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 BMP10O95393 424 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 CYP2F1P24903 491 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 CHRNA5P30532 468 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 ELK3P41970 407 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 EPS8Q12929 822 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 BMPR2Q13873 1038 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 CNGA2Q16280 664 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 PDZK1Q5T2W1 519 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 RIPOR1Q6ZS17 1223 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 BNIPLQ7Z465 357 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 MCOLN2Q8IZK6 566 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 DHRSXQ8N5I4 330 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 UTP15Q8TED0 518 aaKnown RBP13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 DLG3Q92796 817 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 LRRC39Q96DD0 335 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 APOL2Q9BQE5 337 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 PAIP1Q9H074 479 aaKnown RBP13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 RAD21L1Q9H4I0 556 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 GPRC5CQ9NQ84 441 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 LRRC4BQ9NT99 713 aa13.53□□□□□ -0.24
CSPG4P11-201ENST00000560634 TAF6LQ9Y6J9 622 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms