RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 CXorf49A8MYA2 514 aaPredicted RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 TPP1O14773 563 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 CTAGE5O15320 804 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 B3GALT2O43825 422 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 CTNND1O60716 968 aaKnown RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 PPP6R2O75170 966 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 UBXN7O94888 489 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 HRGP04196 525 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 PCP11498 1178 aaKnown RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 ALOX15P16050 662 aaPredicted RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 NPR1P16066 1061 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 DPEP1P16444 411 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 FPR1P21462 350 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 SREBF1P36956 1147 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 CCT5P48643 541 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 FLT3LGP49771 235 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 ZNF75DP51815 510 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 MAP2K6P52564 334 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 COL10A1Q03692 680 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 TRIM29Q14134 588 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 GRM4Q14833 912 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 IL17AQ16552 155 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 RESP18Q5W5W9 173 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 ISM2Q6H9L7 571 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 FAM43BQ6ZT52 329 aaPredicted RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 ZNF572Q7Z3I7 529 aaPredicted RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 SRGAP1Q7Z6B7 1085 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 DENND1CQ8IV53 801 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 TEX11Q8IYF3 940 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 SPC24Q8NBT2 197 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 OR10H5Q8NGA6 315 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 WASF1Q92558 559 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 HDAC10Q969S8 669 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 C1GALT1C1Q96EU7 318 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 ABHD8Q96I13 439 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 TBATAQ96M53 351 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 FAM193BQ96PV7 902 aaPredicted RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 RNF26Q9BY78 433 aaPredicted RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 FOXP1Q9H334 677 aaPredicted RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 CPVLQ9H3G5 476 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 LDAHQ9H6V9 325 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 TTC12Q9H892 705 aaPredicted RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 DDX4Q9NQI0 724 aaKnown RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 TRMT13Q9NUP7 481 aaKnown RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 POLG2Q9UHN1 485 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 MAD2L2Q9UI95 211 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 PYCARDQ9ULZ3 195 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 ARFGEF1Q9Y6D6 1849 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 ARHGEF17Q96PE2 2063 aaPredicted RBP4.83□□□□□ -1.64
TMOD3-207ENST00000560549 SNED1Q8TER0 1413 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 ROBO3Q96MS0 1386 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 FLT1P17948 1338 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 CCDC196A0A1B0GTZ2 297 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 DYTNA2CJ06 578 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 PRSS47A8MTI9 375 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 B5MCH6 92 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 F5H423 210 aaPredicted RBP4.82□□□□□ -1.64
TMOD3-207ENST00000560549 H0YIN7 160 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 TRIM24O15164 1050 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 CYTH3O43739 400 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 KINO60870 393 aaKnown RBP4.82□□□□□ -1.64
TMOD3-207ENST00000560549 NCR1O76036 304 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 BAG3O95817 575 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 ZBED1O96006 694 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 GASTP01350 101 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 GOLGA8HP0CJ92 632 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 CALM1P0DP23 149 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 CALM2P0DP24 149 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 CALM3P0DP25 149 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 KCNA3P22001 575 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 PCSK1P29120 753 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 CHRNA5P30532 468 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 INHBEP58166 350 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 RNASE9P60153 205 aaKnown RBP4.82□□□□□ -1.64
TMOD3-207ENST00000560549 NHLH2Q02577 135 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 PNOCQ13519 176 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 PPP2R5BQ15173 497 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 LLGL1Q15334 1064 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 STX1AQ16623 288 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 SMN1Q16637 294 aaKnown RBP4.82□□□□□ -1.64
TMOD3-207ENST00000560549 BMT2Q1RMZ1 405 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 DPCR1Q3MIW9 517 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 TUBB8Q3ZCM7 444 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 FAM102AQ5T9C2 384 aaPredicted RBP4.82□□□□□ -1.64
TMOD3-207ENST00000560549 JAKMIP3Q5VZ66 844 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 PPP4R3AQ6IN85 833 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 LRRC55Q6ZSA7 311 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 IQCA1Q86XH1 822 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 PLA2G4DQ86XP0 818 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 C2CD5Q86YS7 1000 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 VRK3Q8IV63 474 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 KIAA0319LQ8IZA0 1049 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 CNPY4Q8N129 248 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 OR7D4Q8NG98 312 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 IFI44Q8TCB0 444 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 POF1BQ8WVV4 589 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 ZNF622Q969S3 477 aaKnown RBP eCLIP4.82□□□□□ -1.64
TMOD3-207ENST00000560549 ERP27Q96DN0 273 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 MRGPRX4Q96LA9 322 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms