RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 HAPLN2Q9GZV7 340 aa9.93□□□□□ -0.82
PPP1R3E-204ENST00000559942 PLEKHA5Q9HAU0 1116 aa9.93□□□□□ -0.82
PPP1R3E-204ENST00000559942 CFAP97Q9P2B7 532 aa9.93□□□□□ -0.82
PPP1R3E-204ENST00000559942 ARHGAP28Q9P2N2 729 aa9.93□□□□□ -0.82
PPP1R3E-204ENST00000559942 DSEQ9UL01 958 aa9.93□□□□□ -0.82
PPP1R3E-204ENST00000559942 CPQQ9Y646 472 aa9.93□□□□□ -0.82
PPP1R3E-204ENST00000559942 COL27A1Q8IZC6 1860 aaPredicted RBP9.93□□□□□ -0.82
PPP1R3E-204ENST00000559942 MYH11P35749 1972 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 CCDC187A0A096LP49 1063 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 SFI1A8K8P3 1242 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 CLDN3O15551 220 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 HOXC11O43248 304 aaPredicted RBP9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 HIP1RO75146 1068 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 ABL1P00519 1130 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 CLTAP09496 248 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 ACAT1P24752 427 aaKnown RBP9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 CD38P28907 300 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 TSPY1Q01534 308 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 STRN3Q13033 797 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 SPATA1Q5VX52 437 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 JADE1Q6IE81 842 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 TTC13Q8NBP0 860 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 CPT1CQ8TCG5 803 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 BTBD1Q9H0C5 482 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 RNF38Q9H0F5 515 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 TMEM60Q9H2L4 133 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 ERVMER34-1Q9H9K5 563 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 PRDM8Q9NQV8 689 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 AASDHPPTQ9NRN7 309 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 SEL1LQ9UBV2 794 aa9.92□□□□□ -0.82
PPP1R3E-204ENST00000559942 COL6A5A8TX70 2615 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 A0A1W2PPC4 97 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 TTLL8A6PVC2 850 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 PIRO00625 290 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 SDC3O75056 442 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 PFKLP17858 780 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 TGM2P21980 687 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 RPS6KB1P23443 525 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 MCL1Q07820 350 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 AAMPQ13685 434 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 ENOX2Q16206 610 aaKnown RBP9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 ECM1Q16610 540 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 SP5Q6BEB4 398 aaPredicted RBP9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 RBM44Q6ZP01 1051 aaKnown RBP9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 TAOK1Q7L7X3 1001 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 DAW1Q8N136 415 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 AGXT2Q9BYV1 514 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 DNAJC17Q9NVM6 304 aaKnown RBP9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 PCDHB11Q9Y5F2 797 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 ACANP16112 2415 aa9.91□□□□□ -0.82
PPP1R3E-204ENST00000559942 TLR4O00206 839 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 TULP1O00294 542 aaPredicted RBP9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 RPA1P27694 616 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 TAF6P49848 677 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 COPAP53621 1224 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 SLC7A9P82251 487 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 PDIA5Q14554 519 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 NFE2Q16621 373 aaPredicted RBP9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 TP53INP2Q8IXH6 220 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 SLC25A45Q8N413 288 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 OR4C6Q8NH72 309 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 ARRDC3Q96B67 414 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 OTUB2Q96DC9 234 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 BICD1Q96G01 975 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 C5orf34Q96MH7 638 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 TRIM9Q9C026 710 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 TRPM5Q9NZQ8 1165 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 GTF3C4Q9UKN8 822 aa9.9□□□□□ -0.82
PPP1R3E-204ENST00000559942 A0A1W2PR77 199 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 HEATR9A2RTY3 570 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 PLD2O14939 933 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 HCRTO43612 131 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 IGHV4-34P06331 123 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 MBL2P11226 248 aaPredicted RBP9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 XBP1P17861 261 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 MCM7P33993 719 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 CCT6AP40227 531 aaKnown RBP9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 NXPH1P58417 271 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 USP46P62068 366 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 RAD51AP2Q09MP3 1159 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 TMEM132DQ14C87 1099 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 KIAA0895LQ68EN5 471 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 CPLX2Q6PUV4 134 aaKnown RBP9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 TMEM25Q86YD3 366 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 SPATA2LQ8IUW3 424 aaPredicted RBP9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 FAM177A1Q8N128 213 aaPredicted RBP9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 ERMNQ8TAM6 284 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 CATSPER2Q96P56 530 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 XPO6Q96QU8 1125 aaKnown RBP9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 LHX5Q9H2C1 402 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 SPHK2Q9NRA0 654 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 LATS2Q9NRM7 1088 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 EVA1BQ9NVM1 165 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 PPM1HQ9ULR3 514 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 SNX14Q9Y5W7 946 aa9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 FBN1P35555 2871 aaKnown RBP9.89□□□□□ -0.83
PPP1R3E-204ENST00000559942 EFCAB7A8K855 629 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 NPC1O15118 1278 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 KRT2P35908 639 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms