RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CCAR2Q8N163 923 aaKnown RBP5.49□□□□□ -1.53
SPG11-220ENST00000559933 EMC1Q8N766 993 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 JOSD2Q8TAC2 188 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 SCAMP5Q8TAC9 235 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 MYCBPAPQ8TBZ2 947 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 KIAA1524Q8TCG1 905 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 FAXDC2Q96IV6 333 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 TNIP3Q96KP6 325 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 KLHL5Q96PQ7 755 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 HNRNPABQ99729 332 aaKnown RBP5.49□□□□□ -1.53
SPG11-220ENST00000559933 APOL5Q9BWW9 433 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 MIS12Q9H081 205 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 TTYH1Q9H313 450 aaPredicted RBP5.49□□□□□ -1.53
SPG11-220ENST00000559933 TLR9Q9NR96 1032 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 METTL5Q9NRN9 209 aaKnown RBP5.49□□□□□ -1.53
SPG11-220ENST00000559933 MRPL17Q9NRX2 175 aaKnown RBP5.49□□□□□ -1.53
SPG11-220ENST00000559933 DZANK1Q9NVP4 752 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 HESX1Q9UBX0 185 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 MSRAQ9UJ68 235 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 CDH22Q9UJ99 828 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 GUCA1BQ9UMX6 200 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 COG5Q9UP83 839 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 HYOU1Q9Y4L1 999 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 YIPF1Q9Y548 306 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 EPN1Q9Y6I3 576 aaPredicted RBP5.49□□□□□ -1.53
SPG11-220ENST00000559933 CAPN6Q9Y6Q1 641 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 XIRP2A4UGR9 3374 aa5.49□□□□□ -1.53
SPG11-220ENST00000559933 NCANO14594 1321 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 SPTBN5Q9NRC6 3674 aaKnown RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 TCRBV5S1A1TA0A578 114 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 H3BNC9 293 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 H7C4K7 107 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 XPO1O14980 1071 aaKnown RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 GSC2O15499 205 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 LINC01565O15544 149 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 PAPSS1O43252 624 aaPredicted RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 MED7O43513 233 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 TGM5O43548 720 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 NCK2O43639 380 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 CLASP2O75122 1294 aaKnown RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 LSM8O95777 96 aaKnown RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 CCDC175P0C221 793 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 USP17L7P0C7H9 530 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 CCDC172P0C7W6 258 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 HAPLN1P10915 354 aaPredicted RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 TFE3P19532 575 aaPredicted RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 FSTP19883 344 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 MMP8P22894 467 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 KLRC2P26717 231 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 CDH5P33151 784 aaPredicted RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 GRIK1P39086 918 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 MAGEA1P43355 309 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 TKTL1P51854 596 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 VAV2P52735 878 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 BPIFB4P59827 614 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 PITX1P78337 314 aaPredicted RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 OGDHQ02218 1023 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 KRT17Q04695 432 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 TWF1Q12792 350 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 GPR17Q13304 367 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 PLD1Q13393 1074 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 LRP8Q14114 963 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 SMC1AQ14683 1233 aaKnown RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 RAB30Q15771 203 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 FAM102AQ5T9C2 384 aaPredicted RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 OR6B2Q6IFH4 312 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 OLFML1Q6UWY5 402 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 FAM43BQ6ZT52 329 aaPredicted RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 Q7L0L9 218 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 BHLHA9Q7RTU4 235 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 PIGZQ86VD9 579 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 VPS36Q86VN1 386 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 ERICH1Q86X53 443 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 ZNF677Q86XU0 584 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 XYLT1Q86Y38 959 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 DCP1BQ8IZD4 617 aaKnown RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 MCOLN2Q8IZK6 566 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 ANKRD52Q8NB46 1076 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 TMEM35BQ8NCS4 154 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 VN1R2Q8NFZ6 395 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 SLC7A14Q8TBB6 771 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 MICAL1Q8TDZ2 1067 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 SLC22A17Q8WUG5 538 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 SLC35F5Q8WV83 523 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 UTP4Q969X6 686 aaKnown RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 SMARCD1Q96GM5 515 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 MCEEQ96PE7 176 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 C11orf84Q9BUA3 381 aaPredicted RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 NUP85Q9BW27 656 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 DUSP16Q9BY84 665 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 ULBP1Q9BZM6 244 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 ISCUQ9H1K1 167 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 PRDM12Q9H4Q4 367 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 SLC28A3Q9HAS3 691 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 CYP4F11Q9HBI6 524 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 ZNF334Q9HCZ1 680 aaPredicted RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 DMAP1Q9NPF5 467 aaPredicted RBP5.48□□□□□ -1.53
SPG11-220ENST00000559933 ADAM22Q9P0K1 906 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 GMIPQ9P107 970 aa5.48□□□□□ -1.53
SPG11-220ENST00000559933 STOML1Q9UBI4 398 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms