RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 HIBADHP31937 336 aaKnown RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 HTR7P34969 479 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 ARL3P36405 182 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 STAT1P42224 750 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 HARS2P49590 506 aaKnown RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 CLCN2P51788 898 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 DGKQP52824 942 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 RCAN1P53805 252 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 TIRAPP58753 221 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 SUMO2P61956 95 aaKnown RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 RBM6P78332 1123 aaKnown RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 TIAL1Q01085 375 aaKnown RBP eCLIP2.54□□□□□ -2
GABPB1-209ENST00000559100 SP2Q02086 613 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 MESP2Q0VG99 397 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 TBL3Q12788 808 aaKnown RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 RESTQ13127 1097 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 CAMK1Q14012 370 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 ERV3-1Q14264 604 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 NFIXQ14938 502 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 ACOX1Q15067 660 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 HS1BP3Q53T59 392 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 RILPL1Q5EBL4 403 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 TREML2Q5T2D2 321 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 LIPMQ5VYY2 423 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 FAM205BPQ63HN1 556 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 ANO7Q6IWH7 933 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 KLHL24Q6TFL4 600 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 MAMDC4Q6UXC1 1216 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 DPY19L3Q6ZPD9 716 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 Q6ZRM9 215 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 PIK3AP1Q6ZUJ8 805 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 ENOSF1Q7L5Y1 443 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 ADGRG6Q86SQ4 1221 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 CIR1Q86X95 450 aaPredicted RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 LRRC56Q8IYG6 542 aaPredicted RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 TMEM132CQ8N3T6 1108 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 LRRC71Q8N4P6 559 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 ADAMTS15Q8TE58 950 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 KCNJ9Q92806 393 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 FKBP10Q96AY3 582 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 FAM89AQ96GI7 184 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 PPP1R10Q96QC0 940 aaKnown RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 WDR24Q96S15 920 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 OSBPL9Q96SU4 736 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 CD180Q99467 661 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 MPHOSPH8Q99549 860 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 CCDC68Q9H2F9 335 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 MROH8Q9H579 483 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 PRKRIP1Q9H875 184 aaPredicted RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 GALNT9Q9HCQ5 603 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 NSMCE4AQ9NXX6 385 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 TESQ9UGI8 421 aaKnown RBP2.54□□□□□ -2
GABPB1-209ENST00000559100 VPS4AQ9UN37 437 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 SLC12A4Q9UP95 1085 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 ZBTB1Q9Y2K1 713 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 GDAQ9Y2T3 454 aa2.54□□□□□ -2
GABPB1-209ENST00000559100 COL15A1P39059 1388 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 SYNDIG1LA6NDD5 238 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 FAM90A20PA6NIJ5 464 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 MBD3L5A6NJ08 208 aaPredicted RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 TSPY2A6NKD2 308 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 GTPBP1O00178 669 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 RNASET2O00584 256 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 CES2O00748 559 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 TRIM24O15164 1050 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 SLC16A3O15427 465 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 GPR42O15529 346 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 CA12O43570 354 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 FOXS1O43638 330 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 AHCYL1O43865 530 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 DOK2O60496 412 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 HNRNPCL1O60812 293 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 FAM20BO75063 409 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 CDKL5O76039 1030 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 HEXIM1O94992 359 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 ZFPL1O95159 310 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 NDUFA10O95299 355 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 STARD3NLO95772 234 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 ERBB2P04626 1255 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 CFIP05156 583 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 CYP21A2P08686 494 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 SPARCP09486 303 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 CSF1P09603 554 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 TSPY3P0CV98 308 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 TSPY8P0CW00 308 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 ACADMP11310 421 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 PPP3CBP16298 524 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 ALOX12P18054 663 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 ACO1P21399 889 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 COMTP21964 271 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 GATA3P23771 443 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 NFKBIAP25963 317 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 ACTN2P35609 894 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 LIPAP38571 399 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 PNPLA4P41247 253 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 RAD52P43351 418 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 CTCFP49711 727 aaPredicted RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 CDK7P50613 346 aa2.53□□□□□ -2
GABPB1-209ENST00000559100 CCT4P50991 539 aaKnown RBP2.53□□□□□ -2
GABPB1-209ENST00000559100 SCNN1GP51170 649 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms