RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SLC11A2P49281 568 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 PDCLQ13371 301 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 PUM1Q14671 1186 aaKnown RBP eCLIP8.85□□□□□ -0.99
TPM1-213ENST00000558400 SYCP1Q15431 976 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 ADGRF1Q5T601 910 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 TOGARAM2Q6ZUX3 1019 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 BHLHA9Q7RTU4 235 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 ERICH1Q86X53 443 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 DENND1CQ8IV53 801 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 DHX40Q8IX18 779 aaKnown RBP8.85□□□□□ -0.99
TPM1-213ENST00000558400 MAML2Q8IZL2 1156 aaPredicted RBP8.85□□□□□ -0.99
TPM1-213ENST00000558400 WDTC1Q8N5D0 677 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 C1orf131Q8NDD1 294 aaKnown RBP8.85□□□□□ -0.99
TPM1-213ENST00000558400 IPO4Q8TEX9 1081 aaKnown RBP8.85□□□□□ -0.99
TPM1-213ENST00000558400 NDRG1Q92597 394 aaKnown RBP8.85□□□□□ -0.99
TPM1-213ENST00000558400 EDEM1Q92611 657 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 ACDQ96AP0 544 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 SERPINB11Q96P15 392 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 FUCA2Q9BTY2 467 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 BBS2Q9BXC9 721 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 SLC2A11Q9BYW1 496 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 OCEL1Q9H607 264 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 SYNCQ9H7C4 482 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 POPDC2Q9HBU9 364 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 FBRSL1Q9HCM7 1045 aaKnown RBP8.85□□□□□ -0.99
TPM1-213ENST00000558400 ACP6Q9NPH0 428 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 RTN4Q9NQC3 1192 aaKnown RBP8.85□□□□□ -0.99
TPM1-213ENST00000558400 PRMT8Q9NR22 394 aaPredicted RBP8.85□□□□□ -0.99
TPM1-213ENST00000558400 RBM12Q9NTZ6 932 aaKnown RBP8.85□□□□□ -0.99
TPM1-213ENST00000558400 RRN3Q9NYV6 651 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 SLC12A6Q9UHW9 1150 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 MYO6Q9UM54 1294 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 SLC8A2Q9UPR5 921 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 SIK3Q9Y2K2 1263 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 FAM208BQ5VWN6 2430 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 CHD8Q9HCK8 2581 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 CFAP47Q6ZTR5 3102 aa8.85□□□□□ -0.99
TPM1-213ENST00000558400 E5RJQ4 531 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 GOLGA6L19H0YKK7 550 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 PIK3R2O00459 728 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 IRAK2O43187 625 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 PAPSS1O43252 624 aaPredicted RBP8.84□□□□□ -0.99
TPM1-213ENST00000558400 TIMM44O43615 452 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 CACNG3O60359 315 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 HSF2BPO75031 334 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 TULP3O75386 442 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 SERPINC1P01008 464 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 KLKB1P03952 638 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 HMBSP08397 361 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 TYRP14679 529 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 TBX4P57082 545 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 CDK17Q00537 523 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 GAS6Q14393 721 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 IQCB1Q15051 598 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 GAB4Q2WGN9 574 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 MPPE1Q53F39 396 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 OR6B2Q6IFH4 312 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 TRIM72Q6ZMU5 477 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 TPGS1Q6ZTW0 290 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 SYT13Q7L8C5 426 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 APTXQ7Z2E3 356 aaKnown RBP8.84□□□□□ -0.99
TPM1-213ENST00000558400 CACNA2D4Q7Z3S7 1137 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 TRMT11Q7Z4G4 463 aaKnown RBP8.84□□□□□ -0.99
TPM1-213ENST00000558400 ETFBKMTQ8IXQ9 262 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 PDCD7Q8N8D1 485 aaKnown RBP8.84□□□□□ -0.99
TPM1-213ENST00000558400 ZNF557Q8N988 423 aaPredicted RBP8.84□□□□□ -0.99
TPM1-213ENST00000558400 ZBTB44Q8NCP5 570 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 NELL1Q92832 810 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 WBP2Q969T9 261 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 C18orf8Q96DM3 657 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 TMA16Q96EY4 203 aaKnown RBP8.84□□□□□ -0.99
TPM1-213ENST00000558400 EDEM3Q9BZQ6 932 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 GANQ9H2C0 597 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 HSD3B7Q9H2F3 369 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 NLRC4Q9NPP4 1024 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 ARHGEF4Q9NR80 690 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.84□□□□□ -0.99
TPM1-213ENST00000558400 SFMBT1Q9UHJ3 866 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 STOML2Q9UJZ1 356 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 AGO1Q9UL18 857 aaKnown RBP8.84□□□□□ -0.99
TPM1-213ENST00000558400 TLR6Q9Y2C9 796 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 STARD13Q9Y3M8 1113 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 CHD6Q8TD26 2715 aa8.84□□□□□ -0.99
TPM1-213ENST00000558400 USP24Q9UPU5 2620 aa8.84□□□□□ -1
TPM1-213ENST00000558400 CACNA1IQ9P0X4 2223 aa8.83□□□□□ -1
TPM1-213ENST00000558400 A0A1W2PQC6 194 aa8.83□□□□□ -1
TPM1-213ENST00000558400 NEDD8-MDP1E9PL57 170 aa8.83□□□□□ -1
TPM1-213ENST00000558400 K7EQS6 105 aa8.83□□□□□ -1
TPM1-213ENST00000558400 SCAMP3O14828 347 aaKnown RBP8.83□□□□□ -1
TPM1-213ENST00000558400 NPC1O15118 1278 aa8.83□□□□□ -1
TPM1-213ENST00000558400 ZBTB24O43167 697 aaPredicted RBP8.83□□□□□ -1
TPM1-213ENST00000558400 RNF40O75150 1001 aa8.83□□□□□ -1
TPM1-213ENST00000558400 GFPT2O94808 682 aa8.83□□□□□ -1
TPM1-213ENST00000558400 PENKP01210 267 aaPredicted RBP8.83□□□□□ -1
TPM1-213ENST00000558400 IGLV3-27P01718 113 aa8.83□□□□□ -1
TPM1-213ENST00000558400 FYNP06241 537 aa8.83□□□□□ -1
TPM1-213ENST00000558400 ATP1A3P13637 1013 aa8.83□□□□□ -1
TPM1-213ENST00000558400 NOS2P35228 1153 aa8.83□□□□□ -1
TPM1-213ENST00000558400 SCNN1AP37088 669 aa8.83□□□□□ -1
TPM1-213ENST00000558400 GABRB2P47870 512 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms