RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 KLHL24Q6TFL4 600 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 MACC1Q6ZN28 852 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 TRMT11Q7Z4G4 463 aaKnown RBP14.32□□□□□ -0.12
SPG11-210ENST00000558319 GLT1D1Q96MS3 346 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 TMEM121Q9BTD3 319 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 FOXP3Q9BZS1 431 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 COPG2Q9UBF2 871 aa14.32□□□□□ -0.12
SPG11-210ENST00000558319 FAM86B2P0C5J1 330 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 SLC1A6P48664 564 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 SCNN1BP51168 640 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 LSM3P62310 102 aaKnown RBP14.31□□□□□ -0.12
SPG11-210ENST00000558319 HIST2H2ACQ16777 129 aaPredicted RBP14.31□□□□□ -0.12
SPG11-210ENST00000558319 Q4G0T1 1027 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 C9orf131Q5VYM1 1079 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 HIST2H2AA3Q6FI13 130 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 TPGS1Q6ZTW0 290 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 STRA8Q7Z7C7 330 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 TRAPPC12Q8WVT3 735 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 RORBQ92753 470 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 PLEKHG4BQ96PX9 1271 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 CHID1Q9BWS9 393 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 EHD3Q9NZN3 535 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 WDR35Q9P2L0 1181 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 ZMYM5Q9UJ78 669 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 RBMX2Q9Y388 322 aaKnown RBP14.31□□□□□ -0.12
SPG11-210ENST00000558319 SYNCRIPO60506 623 aaKnown RBP14.31□□□□□ -0.12
SPG11-210ENST00000558319 TAF6P49848 677 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 RAD23AP54725 363 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 MTFR1Q15390 333 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 ADGRF2Q8IZF7 708 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 COMMD8Q9NX08 183 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.31□□□□□ -0.12
SPG11-210ENST00000558319 FBXL21Q9UKT6 434 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 STON1Q9Y6Q2 735 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 RASA1P20936 1047 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 ATP6V1C1P21283 382 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 GATAD2AQ86YP4 633 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 CCDC3Q9BQI4 270 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 CCNT2O60583 730 aaKnown RBP14.31□□□□□ -0.12
SPG11-210ENST00000558319 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.31□□□□□ -0.12
SPG11-210ENST00000558319 CSHL1Q14406 222 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 CBWD2Q8IUF1 395 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 IGDCC4Q8TDY8 1250 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 ANKZF1Q9H8Y5 726 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 RABGEF1Q9UJ41 708 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 ZNF222Q9UK12 451 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 GLI1P08151 1106 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 CETPP11597 493 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 SPANXN2Q5MJ10 180 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 TAF8Q7Z7C8 310 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 DNAJB3Q8WWF6 145 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 LRCH1Q9Y2L9 728 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 AATKQ6ZMQ8 1374 aa14.31□□□□□ -0.12
SPG11-210ENST00000558319 PPP1R3GB7ZBB8 358 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 NR1D2Q14995 579 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 TRMT5Q32P41 509 aaKnown RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 B3GNT6Q6ZMB0 384 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 MARK2Q7KZI7 788 aaKnown RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 EFL1Q7Z2Z2 1120 aaKnown RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 TMC7Q7Z402 723 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 CAMKK1Q8N5S9 505 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 ZFRQ96KR1 1074 aaKnown RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 ZSWIM1Q9BR11 485 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 ISCA1Q9BUE6 129 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 EHD4Q9H223 541 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 MBD2Q9UBB5 411 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 L1RE1Q9UN81 338 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 MROH7Q68CQ1 1323 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 TRDMT1O14717 391 aaKnown RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 PDE9AO76083 593 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 HERVK_113P62684 666 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 WASHC2DQ5SRD0 308 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 KCNV1Q6PIU1 500 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 KRCC1Q9NPI7 259 aaPredicted RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 ABCB10Q9NRK6 738 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 CCDC130P13994 396 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 SLC47A2Q86VL8 602 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 HOMEZQ8IX15 550 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 TTC39CQ8N584 583 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 EMID1Q96A84 441 aaPredicted RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 PRMT6Q96LA8 375 aaPredicted RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 TBX20Q9UMR3 447 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 EFCAB10A6NFE3 127 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 STX4Q12846 297 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 ITPK1Q13572 414 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 ACAD10Q6JQN1 1059 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 ATP6V0D2Q8N8Y2 350 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 SERAC1Q96JX3 654 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 RNF145Q96MT1 663 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 TUT1Q9H6E5 874 aaKnown RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 RGS18Q9NS28 235 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 A0A087X0T9 212 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 ZSCAN5CA6NGD5 496 aaPredicted RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 ENO2P09104 434 aaPredicted RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 FAM228BP0C875 321 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 ETS2P15036 469 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 KLRC2P26717 231 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 SLC11A2P49281 568 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 LGALS3BPQ08380 585 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms