RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 RBM43Q6ZSC3 357 aaKnown RBP9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 TOGARAM2Q6ZUX3 1019 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 CEP68Q76N32 757 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 KBTBD6Q86V97 674 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 RASSF3Q86WH2 238 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 DENND1CQ8IV53 801 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 FMNL3Q8IVF7 1028 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 FAM217AQ8IXS0 508 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 FAM160A2Q8N612 972 aaPredicted RBP9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 TSTD1Q8NFU3 115 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 KCNV2Q8TDN2 545 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 CEP192Q8TEP8 1941 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 CLEC4CQ8WTT0 213 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 IRGQQ8WZA9 623 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 SHC3Q92529 594 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 PLD4Q96BZ4 506 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 FAM81BQ96LP2 452 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 XPO6Q96QU8 1125 aaKnown RBP9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 SLC4A5Q9BY07 1137 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 ZDHHC4Q9NPG8 344 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 ABCC13Q9NSE7 274 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 SAMSN1Q9NSI8 373 aaKnown RBP9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 OLA1Q9NTK5 396 aaKnown RBP9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 DNAJC17Q9NVM6 304 aaKnown RBP9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 PLK2Q9NYY3 685 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 SFMBT1Q9UHJ3 866 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 DACH1Q9UI36 760 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 AJAP1Q9UKB5 411 aaPredicted RBP9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 GMEB2Q9UKD1 530 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 VPS9D1Q9Y2B5 631 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 STARD13Q9Y3M8 1113 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 HBS1LQ9Y450 684 aaKnown RBP9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 PLXND1Q9Y4D7 1925 aa9.18□□□□□ -0.94
SNRPA1-206ENST00000558059 PRRT4C9JH25 899 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 GFRA2O00451 464 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 FBXO21O94952 628 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 LTFP02788 710 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 FYNP06241 537 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 GNA15P30679 374 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 CHKAP35790 457 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 DGKEP52429 567 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 SPEM2Q0P670 501 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 KCNMA1Q12791 1236 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 MEA1Q16626 185 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 VWA3BQ502W6 1294 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 HSP90AA4PQ58FG1 418 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 C10orf76Q5T2E6 689 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 SMYD5Q6GMV2 418 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 CACNA2D4Q7Z3S7 1137 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 FAM114A1Q8IWE2 563 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 SCUBE3Q8IX30 993 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 CPXM2Q8N436 756 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 GPR161Q8N6U8 529 aaKnown RBP9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 STK32AQ8WU08 396 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 RNF139Q8WU17 664 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 BHMTQ93088 406 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 ZC3H10Q96K80 434 aaKnown RBP9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 GBP4Q96PP9 640 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 TUBGCP2Q9BSJ2 902 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 MIS12Q9H081 205 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 NDST4Q9H3R1 872 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 CYTH4Q9UIA0 394 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 CLEC4EQ9ULY5 219 aa9.17□□□□□ -0.94
SNRPA1-206ENST00000558059 KNL1Q8NG31 2342 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 CKAP5Q14008 2032 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 KCNJ18B7U540 433 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 FOXN3O00409 490 aaPredicted RBP9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 DCLK1O15075 740 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 PAPSS1O43252 624 aaPredicted RBP9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 MSI1O43347 362 aaKnown RBP9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 THAP12O43422 761 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 MED7O43513 233 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 LRP3O75074 770 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 IGLV3-27P01718 113 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 CLCN1P35523 988 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 USP8P40818 1118 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 ACADSBP45954 432 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 ID4P47928 161 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 HARS2P49590 506 aaKnown RBP9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 DGKGP49619 791 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 KCNJ12Q14500 433 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 PLK5Q496M5 336 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 EOGTQ5NDL2 527 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 EGFLAMQ63HQ2 1017 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 ANO7Q6IWH7 933 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 NUDT18Q6ZVK8 323 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 TMEM110Q86TL2 294 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 WDTC1Q8N5D0 677 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 ZNF513Q8N8E2 541 aaPredicted RBP9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 MDGA1Q8NFP4 955 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 OLIG1Q8TAK6 271 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 ENOX1Q8TC92 643 aaKnown RBP9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 RMDN1Q96DB5 314 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 LOXL4Q96JB6 756 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 ACOX2Q99424 681 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 TPSD1Q9BZJ3 242 aa9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 DUSP15Q9H1R2 295 aaPredicted RBP9.16□□□□□ -0.94
SNRPA1-206ENST00000558059 CD248Q9HCU0 757 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms