RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 LENG8Q96PV6 779 aaPredicted RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PLEKHG4BQ96PX9 1271 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 POLR3GLQ9BT43 218 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PPCSQ9HAB8 311 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 SNX15Q9NRS6 342 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PPP1R14DQ9NXH3 145 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 ASIC5Q9NY37 505 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 MAFFQ9ULX9 164 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 DAPP1Q9UN19 280 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 SIRT4Q9Y6E7 314 aaPredicted RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 M0QZQ0 153 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PIP5K1BO14986 540 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 HOXC11O43248 304 aaPredicted RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 DNPH1O43598 174 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 RGS10O43665 173 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 CNOT3O75175 753 aaKnown RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 HGFP14210 728 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 THBS4P35443 961 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PBX1P40424 430 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 AARSP49588 968 aaKnown RBP eCLIP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 DIO1P49895 249 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 CCR5P51681 352 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PRKAG1P54619 331 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 FOXL2P58012 376 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PSG6Q00889 435 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 SRSF1Q07955 248 aaKnown RBP eCLIP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 GRM1Q13255 1194 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 BIRC3Q13489 604 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 KCNAB1Q14722 419 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 LARS2Q15031 903 aaKnown RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 ZXDCQ2QGD7 858 aaPredicted RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 GLE1Q53GS7 698 aaKnown RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 CPOQ8IVL8 374 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 NPIPB3Q92617 1050 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 REPS1Q96D71 796 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 LRRC46Q96FV0 321 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 LIN7CQ9NUP9 197 aaKnown RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 DKK3Q9UBP4 350 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 ADAMTS5Q9UNA0 930 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 EYA2O00167 538 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 FAM163BP0C2L3 166 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 TMIGD3P0DMS9 266 aaPredicted RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 RPL15P61313 204 aaKnown RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 CYP4F2P78329 520 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 MYBPC2Q14324 1141 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 CCDC70Q6NSX1 233 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 WDR93Q6P2C0 686 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 DENND1BQ6P3S1 775 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PCGF5Q86SE9 256 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PEG10Q86TG7 708 aaKnown RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 LRRTM4Q86VH4 590 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 TMTC1Q8IUR5 882 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 Q8N1X5 172 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 LCORLQ8N3X6 602 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 GPATCH11Q8N954 259 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 ADPRHL1Q8NDY3 354 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 BEND2Q8NDZ0 799 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 CAGE1Q8TC20 777 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 CCT6BQ92526 530 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 TRMT61AQ96FX7 289 aaKnown RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 FBXL20Q96IG2 436 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 ZNF830Q96NB3 372 aaPredicted RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 SCLT1Q96NL6 688 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 TRAPPC9Q96Q05 1148 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 SENP7Q9BQF6 1050 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 SYNPO2LQ9H987 977 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 AS3MTQ9HBK9 375 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 VPS45Q9NRW7 570 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 TMEM51Q9NW97 253 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 FEM1BQ9UK73 627 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 DERAQ9Y315 318 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PCDHB7Q9Y5E2 793 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 CLDN16Q9Y5I7 305 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 FNDC1Q4ZHG4 1894 aaPredicted RBP1.95□□□□□ -2.1
HIF1A-212ENST00000557538 POC1B-GALNT4F8VUJ3 575 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 FZD7O75084 574 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 RPP40O75818 363 aaKnown RBP1.95□□□□□ -2.1
HIF1A-212ENST00000557538 C1RP00736 705 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 NPSP0C0P6 89 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 ITGAMP11215 1152 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 DRD4P21917 467 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 DGCR2P98153 550 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 SP2Q02086 613 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.95□□□□□ -2.1
HIF1A-212ENST00000557538 GRM4Q14833 912 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 KLHL17Q6TDP4 642 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 GALNT4Q8N4A0 578 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 ATG16L2Q8NAA4 619 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 VPS37AQ8NEZ2 397 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 SH3RF3Q8TEJ3 882 aaPredicted RBP1.95□□□□□ -2.1
HIF1A-212ENST00000557538 RFFLQ8WZ73 363 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 REEP2Q9BRK0 252 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 SORBS1Q9BX66 1292 aaKnown RBP1.95□□□□□ -2.1
HIF1A-212ENST00000557538 MMRN2Q9H8L6 949 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 JMJD4Q9H9V9 463 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 NOD2Q9HC29 1040 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 ARPP21Q9UBL0 812 aaPredicted RBP1.95□□□□□ -2.1
HIF1A-212ENST00000557538 LZTS1Q9Y250 596 aa1.95□□□□□ -2.1
HIF1A-212ENST00000557538 SALL3Q9BXA9 1300 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms