RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 IL18RAPO95256 599 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 ARP10275 920 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 RPS6KB1P23443 525 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
VRK1-207ENST00000557352 DAG1Q14118 895 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 CNGA3Q16281 694 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 ABLIM2Q6H8Q1 611 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 C14orf80Q86SX3 495 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 KRT78Q8N1N4 520 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 TTC8Q8TAM2 541 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 IQCDQ96DY2 449 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 LYZL4Q96KX0 146 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 WDR24Q96S15 920 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 ZBTB26Q9HCK0 441 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 PRDM11Q9NQV5 511 aa4.93□□□□□ -1.62
VRK1-207ENST00000557352 IGLV5-39A0A0G2JS06 123 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 FAM90A8PA6NJQ4 464 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 PRYO14603 147 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 THAP12O43422 761 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 FAM90A13PP0C7W8 464 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 FAM90A24PP0C7X0 464 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 ST6GAL1P15907 406 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 DUSP1P28562 367 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 VPS41P49754 854 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 SLC12A2P55011 1212 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
VRK1-207ENST00000557352 MTA1Q13330 715 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 GAB1Q13480 694 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 GPR162Q16538 588 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 DAB2IPQ5VWQ8 1189 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 KIAA1161Q6NSJ0 714 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 CRTC1Q6UUV9 634 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 PELI3Q8N2H9 469 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 ABHD5Q8WTS1 349 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 RNF26Q9BY78 433 aaPredicted RBP4.92□□□□□ -1.62
VRK1-207ENST00000557352 PNPLA8Q9NP80 782 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 CORO2BQ9UQ03 480 aa4.92□□□□□ -1.62
VRK1-207ENST00000557352 NACADO15069 1562 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 ZNF814B7Z6K7 855 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 FOXN3O00409 490 aaPredicted RBP4.91□□□□□ -1.62
VRK1-207ENST00000557352 AREL1O15033 823 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 SMAD6O43541 496 aaKnown RBP4.91□□□□□ -1.62
VRK1-207ENST00000557352 TLX3O43711 291 aaPredicted RBP4.91□□□□□ -1.62
VRK1-207ENST00000557352 DRD1P21728 446 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 HOXD12P35452 270 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 GPS1Q13098 491 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 ERV3-1Q14264 604 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 SEMA3AQ14563 771 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 MANEAQ5SRI9 462 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 FAM90A2PQ658T7 463 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 ZNF549Q6P9A3 640 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 ATP11CQ8NB49 1132 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 ACRBPQ8NEB7 543 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 AKAP1Q92667 903 aaKnown RBP eCLIP4.91□□□□□ -1.62
VRK1-207ENST00000557352 CELF1Q92879 486 aaKnown RBP4.91□□□□□ -1.62
VRK1-207ENST00000557352 LRRC46Q96FV0 321 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 NLRP4Q96MN2 994 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 MLXIPQ9HAP2 919 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 MOV10Q9HCE1 1003 aaKnown RBP4.91□□□□□ -1.62
VRK1-207ENST00000557352 TMEM8AQ9HCN3 771 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 ASNSD1Q9NWL6 643 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 CNTNAP2Q9UHC6 1331 aa4.91□□□□□ -1.62
VRK1-207ENST00000557352 CLCA1A8K7I4 914 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 RHPN2P1A8MT19 583 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 TTC34A8MYJ7 566 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 CCNT2O60583 730 aaKnown RBP4.9□□□□□ -1.63
VRK1-207ENST00000557352 COQ9O75208 318 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 IGHMBP2P38935 993 aaKnown RBP4.9□□□□□ -1.63
VRK1-207ENST00000557352 IL6STP40189 918 aaPredicted RBP4.9□□□□□ -1.63
VRK1-207ENST00000557352 TMEM196Q5HYL7 178 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 FAXCQ5TGI0 409 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 KLHDC7AQ5VTJ3 777 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 LVRNQ6Q4G3 990 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 RFX6Q8HWS3 928 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 UEVLDQ8IX04 471 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 SLC25A28Q96A46 364 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 TIFAQ96CG3 184 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 SENP7Q9BQF6 1050 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 TUBB6Q9BUF5 446 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 RXFP3Q9NSD7 469 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 TMOD4Q9NZQ9 345 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 MSRB1Q9NZV6 116 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 COG5Q9UP83 839 aa4.9□□□□□ -1.63
VRK1-207ENST00000557352 TRBV5-3A0A0A0MS03 114 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 F8W810 466 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 KCNQ3O43525 872 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 NDUFB8O95169 186 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 EPN2O95208 641 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 TFEBP19484 476 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 MATN1P21941 496 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 NDUFS1P28331 727 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 PIK3CBP42338 1070 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 SOX2P48431 317 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 ZNF84P51523 738 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 ZNF543Q08ER8 600 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 BFSP2Q13515 415 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 KYAT3Q6YP21 454 aaKnown RBP4.89□□□□□ -1.63
VRK1-207ENST00000557352 ADGRF4Q8IZF3 695 aa4.89□□□□□ -1.63
VRK1-207ENST00000557352 CLASRPQ8N2M8 674 aaKnown RBP4.89□□□□□ -1.63
VRK1-207ENST00000557352 SLC44A5Q8NCS7 719 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms