RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 TRIM38O00635 465 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 OPA1O60313 960 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 SDC3O75056 442 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 IL18RAPO95256 599 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 RBMS1P29558 406 aaKnown RBP13.21□□□□□ -0.29
PSEN1-220ENST00000557037 PGFP49763 221 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 DAB2P98082 770 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 GRIN1Q05586 938 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 CLN3Q13286 438 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 TRIM29Q14134 588 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 C3orf38Q5JPI3 329 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 TTC38Q5R3I4 469 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 KANSL1Q7Z3B3 1105 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 MYCT1Q8N699 235 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 LRRC52Q8N7C0 313 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 C4orf32Q8N8J7 132 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 CXorf38Q8TB03 319 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 KLF16Q9BXK1 252 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-220ENST00000557037 OSBPL2Q9H1P3 480 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 EBF2Q9HAK2 575 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 ELOVL2Q9NXB9 296 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 LSM7Q9UK45 103 aaKnown RBP13.21□□□□□ -0.29
PSEN1-220ENST00000557037 FBXO10Q9UK96 956 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 SATB2Q9UPW6 733 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 SLC27A6Q9Y2P4 619 aa13.21□□□□□ -0.29
PSEN1-220ENST00000557037 KIF26BQ2KJY2 2108 aa13.21□□□□□ -0.3
PSEN1-220ENST00000557037 RP1L1Q8IWN7 2480 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-220ENST00000557037 A0A1W2PNU3 283 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-220ENST00000557037 A0A1W2PPC4 97 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 EFSO43281 561 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 RTN3O95197 1032 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-220ENST00000557037 CD38P28907 300 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 RPS14P62263 151 aaKnown RBP13.2□□□□□ -0.3
PSEN1-220ENST00000557037 RBP5P82980 135 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 CAMK2GQ13555 558 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-220ENST00000557037 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 USP53Q70EK8 1073 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 NT5DC4Q86YG4 428 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 NECAB1Q8N987 351 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 IGSF22Q8N9C0 903 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 NSUN7Q8NE18 718 aaKnown RBP13.2□□□□□ -0.3
PSEN1-220ENST00000557037 GANCQ8TET4 914 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 OVCA2Q8WZ82 227 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 CCNL2Q96S94 520 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-220ENST00000557037 MMTAG2Q9BU76 263 aaKnown RBP13.2□□□□□ -0.3
PSEN1-220ENST00000557037 SGK2Q9HBY8 427 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 LRRC4CQ9HCJ2 640 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 SIX4Q9UIU6 781 aa13.2□□□□□ -0.3
PSEN1-220ENST00000557037 A0A1W2PR77 199 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 PMS2P1A4D2B8 440 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 TLR5O60602 858 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 PLA2G4BP0C869 781 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 SLC12A3P55017 1021 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 NXPH1P58417 271 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 SKOR1P84550 965 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 ORC2Q13416 577 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-220ENST00000557037 FOXR1Q6PIV2 292 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 TMC6Q7Z403 805 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 ANKS1BQ7Z6G8 1248 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 FAM26EQ8N5C1 309 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 SYT2Q8N9I0 419 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-220ENST00000557037 ZSWIM2Q8NEG5 633 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 CACTINQ8WUQ7 758 aaKnown RBP13.19□□□□□ -0.3
PSEN1-220ENST00000557037 CCDC97Q96F63 343 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-220ENST00000557037 LIN37Q96GY3 246 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-220ENST00000557037 SLC46A1Q96NT5 459 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 KCNK16Q96T55 309 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 FAM213AQ9BRX8 229 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 ITGA11Q9UKX5 1188 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 CLEC4EQ9ULY5 219 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 NME7Q9Y5B8 376 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 BSNQ9UPA5 3926 aa13.19□□□□□ -0.3
PSEN1-220ENST00000557037 TLR4O00206 839 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 FAM13AO94988 1023 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 DNTTP04053 509 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 RXRGP48443 463 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 TUBP50607 506 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 RIPPLY3P57055 190 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 ARID5AQ03989 594 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 IL17AQ16552 155 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 SKIDA1Q1XH10 827 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 FNDC3BQ53EP0 1204 aaKnown RBP13.18□□□□□ -0.3
PSEN1-220ENST00000557037 SNX30Q5VWJ9 437 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 TMEM215Q68D42 235 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 SLFN12LQ6IEE8 588 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 NCEH1Q6PIU2 408 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 XKR5Q6UX68 686 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 LIMS2Q7Z4I7 341 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 PTRH1Q86Y79 214 aaKnown RBP13.18□□□□□ -0.3
PSEN1-220ENST00000557037 RBBP8NLQ8NC74 664 aaPredicted RBP13.18□□□□□ -0.3
PSEN1-220ENST00000557037 POMGNT1Q8WZA1 660 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 KCNN1Q92952 543 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 HPDLQ96IR7 371 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 PIWIL1Q96J94 861 aaKnown RBP13.18□□□□□ -0.3
PSEN1-220ENST00000557037 MRPL45Q9BRJ2 306 aaKnown RBP13.18□□□□□ -0.3
PSEN1-220ENST00000557037 REEP2Q9BRK0 252 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 B3GNT5Q9BYG0 378 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 RAB34Q9BZG1 259 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 ELOVL4Q9GZR5 314 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 EPN3Q9H201 632 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms