RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 TRAPPC10P48553 1259 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 TUBA4AP68366 448 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 GALNT1Q10472 559 aaPredicted RBP4.79□□□□□ -1.64
FCF1-208ENST00000556814 KCNB1Q14721 858 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 MFSD13AQ14CX5 517 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 LARS2Q15031 903 aaKnown RBP4.79□□□□□ -1.64
FCF1-208ENST00000556814 PRAMEF17Q5VTA0 474 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 DPY19L2P1Q6NXN4 242 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 CACNA2D3Q8IZS8 1091 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 SEMA6DQ8NFY4 1073 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 HIC2Q96JB3 615 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 FAR2Q96K12 515 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 ASB2Q96Q27 587 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 PAAF1Q9BRP4 392 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 ADGRE3Q9BY15 652 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 RNF26Q9BY78 433 aaPredicted RBP4.79□□□□□ -1.64
FCF1-208ENST00000556814 SAP30LQ9HAJ7 183 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 VPS45Q9NRW7 570 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 ASIC5Q9NY37 505 aa4.79□□□□□ -1.64
FCF1-208ENST00000556814 SPATA31A1Q5TZJ5 1347 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 TCRBV5S1A1TA0A578 114 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 GXYLT2A0PJZ3 443 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 LINC01548A6NM66 108 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 EFCAB8A8MWE9 144 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 TMEM232C9JQI7 657 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 CLIC1O00299 241 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 ACKR2O00590 384 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 FCHO1O14526 889 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 DNPH1O43598 174 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 PRKCGP05129 697 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 SLC3A2P08195 630 aaKnown RBP4.78□□□□□ -1.64
FCF1-208ENST00000556814 AKT1P31749 480 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 GALNSP34059 522 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 CHKAP35790 457 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 JAK3P52333 1124 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 KRTAP10-11P60412 298 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 SLC10A2Q12908 348 aaPredicted RBP4.78□□□□□ -1.64
FCF1-208ENST00000556814 GRM4Q14833 912 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 PROSER3Q2NL68 480 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 MSANTD2Q6P1R3 559 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 ACSM6Q6P461 480 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 CCDC174Q6PII3 467 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 KLHL17Q6TDP4 642 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 ZNF788Q6ZQV5 615 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 TRABD2AQ86V40 505 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 CCDC117Q8IWD4 279 aaPredicted RBP4.78□□□□□ -1.64
FCF1-208ENST00000556814 SMC5Q8IY18 1101 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 C16orf71Q8IYS4 520 aaPredicted RBP4.78□□□□□ -1.64
FCF1-208ENST00000556814 PNLDC1Q8NA58 520 aaKnown RBP4.78□□□□□ -1.64
FCF1-208ENST00000556814 OR52L2PQ8NGH6 319 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 GLMPQ8WWB7 406 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 CCT6BQ92526 530 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 PAGR1Q9BTK6 254 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 FSCN3Q9NQT6 498 aa4.78□□□□□ -1.64
FCF1-208ENST00000556814 FYB1O15117 783 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 PRAMEF2O60811 474 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 TNFRSF6BO95407 300 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 LARGE1O95461 756 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 CD38P28907 300 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 GRK6P43250 576 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 ZNF569Q5MCW4 686 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 BHLHA9Q7RTU4 235 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 CHSY1Q86X52 802 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 SLC22A17Q8WUG5 538 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 RTKNQ9BST9 563 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 AGO4Q9HCK5 861 aaKnown RBP4.77□□□□□ -1.65
FCF1-208ENST00000556814 PTPRHQ9HD43 1115 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 KCNK9Q9NPC2 374 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 ABHD10Q9NUJ1 306 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 PTGFRNQ9P2B2 879 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 SCAF8Q9UPN6 1271 aaKnown RBP4.77□□□□□ -1.65
FCF1-208ENST00000556814 PCDHB2Q9Y5E7 798 aa4.77□□□□□ -1.65
FCF1-208ENST00000556814 CCDC187A0A096LP49 1063 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.76□□□□□ -1.65
FCF1-208ENST00000556814 PRRT4C9JH25 899 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 TRIM38O00635 465 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 RNF8O76064 485 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 ACTL6BO94805 426 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 CER1O95813 267 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 KLRK1P26718 216 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 WDR5P61964 334 aaKnown RBP4.76□□□□□ -1.65
FCF1-208ENST00000556814 AP2B1P63010 937 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 RAE1P78406 368 aaKnown RBP4.76□□□□□ -1.65
FCF1-208ENST00000556814 CNGA3Q16281 694 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 PFKFB3Q16875 520 aaPredicted RBP4.76□□□□□ -1.65
FCF1-208ENST00000556814 TRIM60Q495X7 471 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 TMEM119Q4V9L6 283 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 CC2D1BQ5T0F9 858 aaKnown RBP4.76□□□□□ -1.65
FCF1-208ENST00000556814 KIAA1614Q5VZ46 1190 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 TANGO2Q6ICL3 276 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 NFRKBQ6P4R8 1299 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 RANBP10Q6VN20 620 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 RAB11FIP2Q7L804 512 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 MYCT1Q8N699 235 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 SPATA5Q8NB90 893 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 TRAPPC12Q8WVT3 735 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 PRR11Q96HE9 360 aaPredicted RBP4.76□□□□□ -1.65
FCF1-208ENST00000556814 KAZALD1Q96I82 304 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 RITA1Q96K30 269 aa4.76□□□□□ -1.65
FCF1-208ENST00000556814 HERPUD2Q9BSE4 406 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms