RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 KCNK18Q7Z418 384 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 SFR1Q86XK3 245 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 SUGP1Q8IWZ8 645 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 RHOT2Q8IXI1 618 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 ZC3H3Q8IXZ2 948 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 CACNA2D3Q8IZS8 1091 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 SYCP3Q8IZU3 236 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 NEK9Q8TD19 979 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 ACTRT1Q8TDG2 376 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 IPO4Q8TEX9 1081 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 LRRC15Q8TF66 581 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 ZNF473Q8WTR7 871 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 U2AF1L4Q8WU68 220 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 SCFD1Q8WVM8 642 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 CASKIN2Q8WXE0 1202 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 RFFLQ8WZ73 363 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 DNAJC19Q96DA6 116 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 MS4A14Q96JA4 679 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 CABS1Q96KC9 395 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 GUCD1Q96NT3 240 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 CRAMP1Q96RY5 1269 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 FMO2Q99518 471 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 KCNJ15Q99712 375 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 PTPN18Q99952 460 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 MRIQ9BWK5 157 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 BTBD2Q9BX70 525 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 NELFAQ9H3P2 528 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 TUFT1Q9NNX1 390 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 IGSF5Q9NSI5 407 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 GALNT8Q9NY28 637 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 SMARCAL1Q9NZC9 954 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 EHD2Q9NZN4 543 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 TMOD2Q9NZR1 351 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 SUCLA2Q9P2R7 463 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 GGA2Q9UJY4 613 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 FBXL5Q9UKA1 691 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 MTUS1Q9ULD2 1270 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 TRAF3IP3Q9Y228 551 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 ATP23Q9Y6H3 246 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 CAPN7Q9Y6W3 813 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 LAMA2P24043 3122 aaKnown RBP4.69□□□□□ -1.66
ATXN3-241ENST00000556374 MGAMO43451 1857 aa4.69□□□□□ -1.66
ATXN3-241ENST00000556374 CYP3A7-CYP3A51PA0A087WV96 503 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 CCDC163A0A0D9SF12 145 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 ESYT3A0FGR9 886 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 FRMD3A2A2Y4 597 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 ARHGEF35A5YM69 484 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 MANSC4A6NHS7 340 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 VGLL3A8MV65 326 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 MIF4GDA9UHW6 222 aaKnown RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 EFCAB14O75071 495 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 MED24O75448 989 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 NPTXRO95502 500 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 EYA4O95677 639 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 FAM107AO95990 144 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 KRT14P02533 472 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 MYBP10242 640 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 TNFAIP3P21580 790 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 MUTP22033 750 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 CYP3A7P24462 503 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 SOX5P35711 763 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 SLC16A2P36021 539 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 SREBF1P36956 1147 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 MDH1P40925 334 aaKnown RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 GLRBP48167 497 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 RBM5P52756 815 aaKnown RBP eCLIP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 NPEPPSP55786 919 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 DR1Q01658 176 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 GABPAQ06546 454 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 CRHR2Q13324 411 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 EIF4HQ15056 248 aaKnown RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 PPP2R5AQ15172 486 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 CRY1Q16526 586 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 BMT2Q1RMZ1 405 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 USH1GQ495M9 461 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 CERKLQ49MI3 558 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 Q4G0T1 1027 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 FAM47CQ5HY64 1035 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 GKAP1Q5VSY0 366 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 SYDE2Q5VT97 1194 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 NAA35Q5VZE5 725 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 TTC19Q6DKK2 380 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 MAMDC4Q6UXC1 1216 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 ARHGAP36Q6ZRI8 547 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 EP400NLQ6ZTU2 488 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 TAOK1Q7L7X3 1001 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 YTHDF3Q7Z739 585 aaKnown RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 TAX1BP1Q86VP1 789 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 NLRP14Q86W24 1093 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 CNPY4Q8N129 248 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 SH2D3CQ8N5H7 860 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 MYCT1Q8N699 235 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 SYT2Q8N9I0 419 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-241ENST00000556374 GMCL1P1Q8NEA9 526 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 TBC1D16Q8TBP0 767 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 MYCBPAPQ8TBZ2 947 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 SH3TC2Q8TF17 1288 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 HDAC7Q8WUI4 952 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 DYDC1Q8WWB3 177 aa4.68□□□□□ -1.66
ATXN3-241ENST00000556374 HAS1Q92839 578 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms