RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 LACTBL1A8MY62 500 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 BRAFP15056 766 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 SOX2P48431 317 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 PGGT1BP53609 377 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 WDR5P61964 334 aaKnown RBP4.28□□□□□ -1.72
SNX6-204ENST00000555541 ACOX1Q15067 660 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 PPP2R5AQ15172 486 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 AASDHQ4L235 1098 aaPredicted RBP4.28□□□□□ -1.72
SNX6-204ENST00000555541 ASPHD1Q5U4P2 390 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 NUGGCQ68CJ6 796 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 SESTD1Q86VW0 696 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 RFX6Q8HWS3 928 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 VPS50Q96JG6 964 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 DECR2Q9NUI1 292 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 AFF4Q9UHB7 1163 aaKnown RBP4.28□□□□□ -1.72
SNX6-204ENST00000555541 TPCN1Q9ULQ1 816 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 PRYO14603 147 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 CBFA2T3O75081 653 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 ST6GAL1P15907 406 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 TPH1P17752 444 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 ALDH7A1P49419 539 aaKnown RBP4.27□□□□□ -1.73
SNX6-204ENST00000555541 CACNB3P54284 484 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 P2RX3P56373 397 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 RAE1P78406 368 aaKnown RBP4.27□□□□□ -1.73
SNX6-204ENST00000555541 ARHGAP29Q52LW3 1261 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 ZNF324BQ6AW86 544 aaPredicted RBP4.27□□□□□ -1.73
SNX6-204ENST00000555541 RBM23Q86U06 439 aaKnown RBP4.27□□□□□ -1.73
SNX6-204ENST00000555541 SUN3Q8TAQ9 357 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 PIGKQ92643 395 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 FAM227BQ96M60 508 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 TMEM204Q9BSN7 226 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 TUBB6Q9BUF5 446 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 FAM204AQ9H8W3 233 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 PAPOLBQ9NRJ5 636 aaKnown RBP4.27□□□□□ -1.73
SNX6-204ENST00000555541 ARL8BQ9NVJ2 186 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 AGO2Q9UKV8 859 aaKnown RBP4.27□□□□□ -1.73
SNX6-204ENST00000555541 EID1Q9Y6B2 187 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 NOTCH3Q9UM47 2321 aa4.27□□□□□ -1.73
SNX6-204ENST00000555541 TMEM225BP0DP42 221 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 RBL1P28749 1068 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 ZNF84P51523 738 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 SLC12A2P55011 1212 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 MTA1Q13330 715 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 KCNJ12Q14500 433 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 LRTOMTQ8WZ04 291 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 MIB2Q96AX9 1013 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 PIMREGQ9BSJ6 248 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 CINPQ9BW66 212 aaPredicted RBP4.26□□□□□ -1.73
SNX6-204ENST00000555541 ARHGAP39Q9C0H5 1083 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 MYLK2Q9H1R3 596 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 ABHD10Q9NUJ1 306 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 DDX20Q9UHI6 824 aaKnown RBP4.26□□□□□ -1.73
SNX6-204ENST00000555541 HDAC9Q9UKV0 1011 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 PCDHA7Q9UN72 937 aa4.26□□□□□ -1.73
SNX6-204ENST00000555541 HEMK1Q9Y5R4 338 aaPredicted RBP4.26□□□□□ -1.73
SNX6-204ENST00000555541 IFITM10A6NMD0 228 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 F8W810 466 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 NTN3O00634 580 aaPredicted RBP4.25□□□□□ -1.73
SNX6-204ENST00000555541 WDR47O94967 919 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 HRGP04196 525 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 S100BP04271 92 aaPredicted RBP4.25□□□□□ -1.73
SNX6-204ENST00000555541 ZKSCAN1P17029 563 aaPredicted RBP4.25□□□□□ -1.73
SNX6-204ENST00000555541 TBXAS1P24557 533 aaPredicted RBP4.25□□□□□ -1.73
SNX6-204ENST00000555541 HOXA11P31270 313 aaPredicted RBP4.25□□□□□ -1.73
SNX6-204ENST00000555541 HOXD12P35452 270 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 POLD3Q15054 466 aaPredicted RBP4.25□□□□□ -1.73
SNX6-204ENST00000555541 RNF220Q5VTB9 566 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 UNC13DQ70J99 1090 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 B4GALNT4Q76KP1 1039 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 CHST15Q7LFX5 561 aaPredicted RBP4.25□□□□□ -1.73
SNX6-204ENST00000555541 NR4A3Q92570 626 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 CELF1Q92879 486 aaKnown RBP4.25□□□□□ -1.73
SNX6-204ENST00000555541 GJA10Q969M2 543 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 APIPQ96GX9 242 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 LRRC27Q9C0I9 530 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 THSD1Q9NS62 852 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 SELENONQ9NZV5 590 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 HPSEQ9Y251 543 aa4.25□□□□□ -1.73
SNX6-204ENST00000555541 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 KIR2DS5A0A0G2JLQ3 304 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 KIR2DS3K7RE56 304 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 UGDHO60701 494 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 SNX2O60749 519 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 SYF2O95926 243 aaKnown RBP4.24□□□□□ -1.73
SNX6-204ENST00000555541 ZBED1O96006 694 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 WNT1P04628 370 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 MYF5P13349 255 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 PBX1P40424 430 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 PPATQ06203 517 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 PTGR1Q14914 329 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 ASIC2Q16515 512 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 SMTNL2Q2TAL5 461 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 PIK3CD-AS1Q5SR53 167 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 CCDC149Q6ZUS6 474 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 SRGAP1Q7Z6B7 1085 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 YAF2Q8IY57 180 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 ARL14EPQ8N8R7 260 aaPredicted RBP4.24□□□□□ -1.73
SNX6-204ENST00000555541 FAM156AQ8NDB6 213 aa4.24□□□□□ -1.73
SNX6-204ENST00000555541 MBD3L2Q8NHZ7 208 aaPredicted RBP4.24□□□□□ -1.73
SNX6-204ENST00000555541 JDP2Q8WYK2 163 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms