RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 NCK2O43639 380 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 PQBP1O60828 265 aaKnown RBP8.66□□□□□ -1.02
LINC00641-201ENST00000555379 GCATO75600 419 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 USP17L7P0C7H9 530 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 ALOX15P16050 662 aaPredicted RBP8.66□□□□□ -1.02
LINC00641-201ENST00000555379 ATP5C1P36542 298 aaKnown RBP8.66□□□□□ -1.02
LINC00641-201ENST00000555379 DEFA1P59665 94 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 DEFA3P59666 94 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 SNRPD1P62314 119 aaKnown RBP8.66□□□□□ -1.02
LINC00641-201ENST00000555379 SLC12A1Q13621 1099 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 ADRM1Q16186 407 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 CLEC16AQ2KHT3 1053 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 HECTD3Q5T447 861 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 DAB2IPQ5VWQ8 1189 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 C7orf57Q8NEG2 295 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 COG4Q9H9E3 785 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 NEK6Q9HC98 313 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 EURLQ9NYK6 297 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 HPSEQ9Y251 543 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 PYGMP11217 842 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 KRT20P35900 424 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 PLA2G4AP47712 749 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 YWHAZP63104 245 aaKnown RBP8.66□□□□□ -1.02
LINC00641-201ENST00000555379 KIZQ2M2Z5 673 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 TRIM16LQ309B1 348 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 SPRYD7Q5W111 196 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 ZCCHC8Q6NZY4 707 aaKnown RBP8.66□□□□□ -1.02
LINC00641-201ENST00000555379 EXT2Q93063 718 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 RUSC1Q9BVN2 902 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 POPDC2Q9HBU9 364 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 C20orf96Q9NUD7 363 aaPredicted RBP8.66□□□□□ -1.02
LINC00641-201ENST00000555379 DNAAF2Q9NVR5 837 aaKnown RBP8.66□□□□□ -1.02
LINC00641-201ENST00000555379 SHOC2Q9UQ13 582 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 NEU2Q9Y3R4 380 aa8.66□□□□□ -1.02
LINC00641-201ENST00000555379 CASZ1Q86V15 1759 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 URADA6NGE7 173 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 NFIBO00712 420 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 MED24O75448 989 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 EOMESO95936 686 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 IRF1P10914 325 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 UQCRBP14927 111 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 ACADSP16219 412 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 GRK2P25098 689 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 DDX6P26196 483 aaKnown RBP eCLIP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 RGS7P49802 495 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 HK2P52789 917 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 DAB2P98082 770 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 STX5Q13190 355 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 PTK7Q13308 1070 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 KPNB1Q14974 876 aaKnown RBP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 ZRANB3Q5FWF4 1079 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 MARC1Q5VT66 337 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 TAGAPQ8N103 731 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 TMEM117Q9H0C3 514 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 TMEM165Q9HC07 324 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 AP4E1Q9UPM8 1137 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 CDYLQ9Y232 598 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 XRN1Q8IZH2 1706 aaKnown RBP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 NOS2P35228 1153 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 ROR2Q01974 943 aaKnown RBP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 PAGE2BQ5JRK9 111 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 RARS2Q5T160 578 aaKnown RBP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 ERMARDQ5T6L9 678 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 BEND7Q8N7W2 519 aaPredicted RBP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 SUN5Q8TC36 379 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 RIT1Q92963 219 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 HES6Q96HZ4 224 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 RBM15Q96T37 977 aaKnown RBP eCLIP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 GORASP1Q9BQQ3 440 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 MRPL1Q9BYD6 325 aaKnown RBP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 MRPS26Q9BYN8 205 aaKnown RBP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 CISHQ9NSE2 258 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 FAM49BQ9NUQ9 324 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 WWOXQ9NZC7 414 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 BTBD7Q9P203 1132 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 AK9Q5TCS8 1911 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 ATP9BO43861 1147 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 CST8O60676 142 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 PEX14O75381 377 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 DDHD2O94830 711 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 MYL4P12829 197 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 UBA1P22314 1058 aaKnown RBP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 HSPA13P48723 471 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 EIF2B2P49770 351 aaKnown RBP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 CDH17Q12864 832 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 TRIP13Q15645 432 aaPredicted RBP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 FAM171A1Q5VUB5 890 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 PDE12Q6L8Q7 609 aaKnown RBP8.65□□□□□ -1.02
LINC00641-201ENST00000555379 CYP4Z1Q86W10 505 aa8.65□□□□□ -1.02
LINC00641-201ENST00000555379 NFAT5O94916 1531 aa8.65□□□□□ -1.03
LINC00641-201ENST00000555379 ARPC4-TTLL3A0A0A6YYG9 625 aa8.65□□□□□ -1.03
LINC00641-201ENST00000555379 PIPSLA2A3N6 862 aa8.65□□□□□ -1.03
LINC00641-201ENST00000555379 GOLGA8RI6L899 631 aa8.65□□□□□ -1.03
LINC00641-201ENST00000555379 GYG2O15488 501 aa8.65□□□□□ -1.03
LINC00641-201ENST00000555379 PGK2P07205 417 aa8.65□□□□□ -1.03
LINC00641-201ENST00000555379 APRTP07741 180 aa8.65□□□□□ -1.03
LINC00641-201ENST00000555379 SMIM10L2AP0DMW4 78 aa8.65□□□□□ -1.03
LINC00641-201ENST00000555379 SMIM10L2BP0DMW5 78 aa8.65□□□□□ -1.03
LINC00641-201ENST00000555379 MSH3P20585 1137 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms