RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CYB561D2O14569 222 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 NME5P56597 212 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 CDH17Q12864 832 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 ACAP1Q15027 740 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 LPCAT2Q7L5N7 544 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 OTOP1Q7RTM1 612 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 ETNPPLQ8TBG4 499 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 KCTD14Q9BQ13 255 aaPredicted RBP14.31□□□□□ -0.12
VTI1B-204ENST00000554659 APOL2Q9BQE5 337 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 KCNK4Q9NYG8 393 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 ZMYND8Q9ULU4 1186 aaPredicted RBP14.31□□□□□ -0.12
VTI1B-204ENST00000554659 BARX2Q9UMQ3 279 aaPredicted RBP14.31□□□□□ -0.12
VTI1B-204ENST00000554659 KCNH4Q9UQ05 1017 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 IL1R1P14778 569 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 ATP6V1B2P21281 511 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 GMPSP49915 693 aaPredicted RBP14.31□□□□□ -0.12
VTI1B-204ENST00000554659 TAF1CQ15572 869 aaPredicted RBP14.31□□□□□ -0.12
VTI1B-204ENST00000554659 SLC45A4Q5BKX6 768 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 OSCP1Q8WVF1 389 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 GINS4Q9BRT9 223 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 FAM192AQ9GZU8 254 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 UBAP1Q9NZ09 502 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 C17orf102A2RUQ5 167 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 PDE2AO00408 941 aaPredicted RBP14.31□□□□□ -0.12
VTI1B-204ENST00000554659 DDHD2O94830 711 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 GLP2RO95838 553 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 NFIL3Q16649 462 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 KYAT3Q6YP21 454 aaKnown RBP14.31□□□□□ -0.12
VTI1B-204ENST00000554659 KRT78Q8N1N4 520 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 RMND5BQ96G75 393 aaPredicted RBP14.31□□□□□ -0.12
VTI1B-204ENST00000554659 PDGFCQ9NRA1 345 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 CYP39A1Q9NYL5 469 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 DNPEPQ9ULA0 475 aa14.31□□□□□ -0.12
VTI1B-204ENST00000554659 TRIM24O15164 1050 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 CBX6O95503 412 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 MZF1P28698 734 aaPredicted RBP14.3□□□□□ -0.12
VTI1B-204ENST00000554659 CD151P48509 253 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 RSBN1Q5VWQ0 802 aaPredicted RBP14.3□□□□□ -0.12
VTI1B-204ENST00000554659 RSPH1Q8WYR4 309 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 PRMT6Q96LA8 375 aaPredicted RBP14.3□□□□□ -0.12
VTI1B-204ENST00000554659 CATSPER2Q96P56 530 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 YIPF2Q9BWQ6 316 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 ROGDIQ9GZN7 287 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 CROTQ9UKG9 612 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 JCADQ9P266 1359 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 NCF1BA6NI72 391 aaPredicted RBP14.3□□□□□ -0.12
VTI1B-204ENST00000554659 NCF1CA8MVU1 366 aaPredicted RBP14.3□□□□□ -0.12
VTI1B-204ENST00000554659 FAM86B1E9PN63 330 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 SNX3O60493 162 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 FAM86B2P0C5J1 330 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 MLNP12872 115 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 NCF1P14598 390 aaPredicted RBP14.3□□□□□ -0.12
VTI1B-204ENST00000554659 RAG1P15918 1043 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 ERO1BQ86YB8 467 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 HTR3CQ8WXA8 447 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 LRRC39Q96DD0 335 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 MTMR9Q96QG7 549 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 NUDT12Q9BQG2 462 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 DMAP1Q9NPF5 467 aaPredicted RBP14.3□□□□□ -0.12
VTI1B-204ENST00000554659 COMMD8Q9NX08 183 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 POLG2Q9UHN1 485 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 MROH7Q68CQ1 1323 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 EPB42P16452 691 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 CRABP2P29373 138 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 LHX1P48742 406 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 BACE1P56817 501 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 ATP1A4Q13733 1029 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 RRP1BQ14684 758 aaKnown RBP14.3□□□□□ -0.12
VTI1B-204ENST00000554659 ZNF184Q99676 751 aaPredicted RBP14.3□□□□□ -0.12
VTI1B-204ENST00000554659 KRT84Q9NSB2 600 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 PCYOX1Q9UHG3 505 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 DYTNA2CJ06 578 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 APOC4-APOC2K7ER74 178 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 APOC2P02655 101 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 PAEPP09466 180 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 NPY2RP49146 381 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 CRELD2Q6UXH1 353 aaPredicted RBP14.3□□□□□ -0.12
VTI1B-204ENST00000554659 DHFR2Q86XF0 187 aa14.3□□□□□ -0.12
VTI1B-204ENST00000554659 ADGRB2O60241 1585 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 HACD1B0YJ81 288 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 ADRA1DP25100 572 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 POU1F1P28069 291 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 RRM2P31350 389 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 LAMTOR4Q0VGL1 99 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 CNTN1Q12860 1018 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 PGM5Q15124 567 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 CNGA2Q16280 664 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 PRKD2Q9BZL6 878 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 CHST7Q9NS84 486 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 INTS13Q9NVM9 706 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 RABGEF1Q9UJ41 708 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 HACL1Q9UJ83 578 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 WDR27A2RRH5 827 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 MAP3K13O43283 966 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 EIF4BP23588 611 aaKnown RBP14.29□□□□□ -0.12
VTI1B-204ENST00000554659 PSMA3P25788 255 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 SHMT1P34896 483 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 ANXA11P50995 505 aaKnown RBP14.29□□□□□ -0.12
VTI1B-204ENST00000554659 ALDH6A1Q02252 535 aaKnown RBP14.29□□□□□ -0.12
VTI1B-204ENST00000554659 FAAP100Q0VG06 881 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms