RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 LETM1O95202 739 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-213ENST00000554508 LTFP02788 710 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 ZNF806P0C7X5 589 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 HNRNPLP14866 589 aaKnown RBP eCLIP9.11□□□□□ -0.956e-6■■□□□ 12.3
ACTN1-213ENST00000554508 GNA15P30679 374 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 GPD2P43304 727 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 MAN2A1Q16706 1144 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 RSPO4Q2I0M5 234 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-213ENST00000554508 DPCR1Q3MIW9 517 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 FYB2Q5VWT5 728 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 ANO7Q6IWH7 933 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 MSANTD2Q6P1R3 559 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 RBM43Q6ZSC3 357 aaKnown RBP9.11□□□□□ -0.95
ACTN1-213ENST00000554508 UNC45BQ8IWX7 931 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 OLIG1Q8TAK6 271 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 UCMAQ8WVF2 138 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 ZNF606Q8WXB4 792 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 EDEM1Q92611 657 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 AZIN2Q96A70 460 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 CRACR2AQ9BSW2 395 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 TRIM62Q9BVG3 475 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 SLC4A5Q9BY07 1137 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 SLC2A11Q9BYW1 496 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 ARRDC1-AS1Q9H2J1 176 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 PLK2Q9NYY3 685 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 SFMBT1Q9UHJ3 866 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 STOML2Q9UJZ1 356 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 DCHS1Q96JQ0 3298 aa9.11□□□□□ -0.95
ACTN1-213ENST00000554508 TCRBV21S2A2A0A5A6 115 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 SYCE3A1L190 88 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 PRRT4C9JH25 899 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 THAP12O43422 761 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 GABBR2O75899 941 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 CALCAP01258 141 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 PON1P27169 355 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 GBP1P32455 592 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 RING1Q06587 406 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 STX1AQ16623 288 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 ARHGAP44Q17R89 818 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 VWA3BQ502W6 1294 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 MPPE1Q53F39 396 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 ADGRF1Q5T601 910 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 EGFLAMQ63HQ2 1017 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 NUGGCQ68CJ6 796 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 PRR23CQ6ZRP0 262 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 TOGARAM2Q6ZUX3 1019 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 BEND5Q7L4P6 421 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 TMEM110Q86TL2 294 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 CHPFQ8IZ52 775 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 PGBD3Q8N328 593 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 MDGA1Q8NFP4 955 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 NETO1Q8TDF5 533 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 DDI1Q8WTU0 396 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 SHC3Q92529 594 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 PIWIL1Q96J94 861 aaKnown RBP9.1□□□□□ -0.95
ACTN1-213ENST00000554508 SPACA7Q96KW9 195 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 TUBGCP2Q9BSJ2 902 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 RTKNQ9BST9 563 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 TPSD1Q9BZJ3 242 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 NDST4Q9H3R1 872 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 ST7Q9NRC1 585 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 BCCIPQ9P287 314 aaKnown RBP eCLIP9.1□□□□□ -0.95
ACTN1-213ENST00000554508 CDV3Q9UKY7 258 aaKnown RBP9.1□□□□□ -0.95
ACTN1-213ENST00000554508 HCN2Q9UL51 889 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 CKAP5Q14008 2032 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 TNRC6BQ9UPQ9 1833 aaKnown RBP9.1□□□□□ -0.95
ACTN1-213ENST00000554508 DMXL1Q9Y485 3027 aa9.1□□□□□ -0.95
ACTN1-213ENST00000554508 DNAH14Q0VDD8 3507 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 BECN2A8MW95 431 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 PIK3R2O00459 728 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 DCLK1O15075 740 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 MAP3K13O43283 966 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 TIMM44O43615 452 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 IGLV3-27P01718 113 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 NCAM1P13591 858 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 HOXB2P14652 356 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 USP8P40818 1118 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 P2RY2P41231 377 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 SLC11A2P49281 568 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 TBX4P57082 545 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 SNX16P57768 344 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 BPIFB4P59827 614 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 PTK2Q05397 1052 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 TYRO3Q06418 890 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 NNTQ13423 1086 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 EIF4HQ15056 248 aaKnown RBP9.09□□□□□ -0.95
ACTN1-213ENST00000554508 SPDYCQ5MJ68 293 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 PLA2G2CQ5R387 149 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 PMS2CLQ68D20 193 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 DENND1BQ6P3S1 775 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 GJB7Q6PEY0 223 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 DGLUCYQ7Z3D6 616 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 ANKS1BQ7Z6G8 1248 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 SCUBE3Q8IX30 993 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 ZNF557Q8N988 423 aaPredicted RBP9.09□□□□□ -0.95
ACTN1-213ENST00000554508 C12orf50Q8NA57 414 aaPredicted RBP9.09□□□□□ -0.95
ACTN1-213ENST00000554508 CLEC4CQ8WTT0 213 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 HMGB4Q8WW32 186 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 BHMTQ93088 406 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 TMA16Q96EY4 203 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms